Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5736 | 17431;17432;17433 | chr2:178731560;178731559;178731558 | chr2:179596287;179596286;179596285 |
N2AB | 5419 | 16480;16481;16482 | chr2:178731560;178731559;178731558 | chr2:179596287;179596286;179596285 |
N2A | 4492 | 13699;13700;13701 | chr2:178731560;178731559;178731558 | chr2:179596287;179596286;179596285 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1473469854 | -1.668 | 0.837 | N | 0.558 | 0.241 | 0.533950601487 | gnomAD-2.1.1 | 7.26E-06 | None | None | None | None | N | None | 8.29E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs1473469854 | -1.668 | 0.837 | N | 0.558 | 0.241 | 0.533950601487 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1473469854 | -1.668 | 0.837 | N | 0.558 | 0.241 | 0.533950601487 | gnomAD-4.0.0 | 7.46317E-06 | None | None | None | None | N | None | 9.37885E-05 | 0 | None | 0 | 0 | None | 0 | 1.65289E-04 | 8.50025E-07 | 0 | 4.82501E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2933 | likely_benign | 0.244 | benign | -2.189 | Highly Destabilizing | 0.584 | D | 0.492 | neutral | None | None | None | None | N |
I/C | 0.8774 | likely_pathogenic | 0.8565 | pathogenic | -1.532 | Destabilizing | 0.993 | D | 0.671 | neutral | None | None | None | None | N |
I/D | 0.9705 | likely_pathogenic | 0.9575 | pathogenic | -1.986 | Destabilizing | 0.96 | D | 0.741 | deleterious | None | None | None | None | N |
I/E | 0.9307 | likely_pathogenic | 0.8972 | pathogenic | -1.815 | Destabilizing | 0.872 | D | 0.701 | prob.neutral | None | None | None | None | N |
I/F | 0.4501 | ambiguous | 0.4614 | ambiguous | -1.261 | Destabilizing | 0.016 | N | 0.335 | neutral | N | 0.490147689 | None | None | N |
I/G | 0.8285 | likely_pathogenic | 0.796 | pathogenic | -2.692 | Highly Destabilizing | 0.872 | D | 0.653 | neutral | None | None | None | None | N |
I/H | 0.9595 | likely_pathogenic | 0.9462 | pathogenic | -2.053 | Highly Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | N |
I/K | 0.9273 | likely_pathogenic | 0.8869 | pathogenic | -1.469 | Destabilizing | 0.872 | D | 0.701 | prob.neutral | None | None | None | None | N |
I/L | 0.1081 | likely_benign | 0.1149 | benign | -0.773 | Destabilizing | 0.007 | N | 0.164 | neutral | N | 0.405736794 | None | None | N |
I/M | 0.0914 | likely_benign | 0.0953 | benign | -0.789 | Destabilizing | 0.54 | D | 0.34 | neutral | N | 0.480624129 | None | None | N |
I/N | 0.7503 | likely_pathogenic | 0.6942 | pathogenic | -1.612 | Destabilizing | 0.947 | D | 0.737 | prob.delet. | N | 0.457173371 | None | None | N |
I/P | 0.5387 | ambiguous | 0.4588 | ambiguous | -1.221 | Destabilizing | 0.993 | D | 0.727 | prob.delet. | None | None | None | None | N |
I/Q | 0.8979 | likely_pathogenic | 0.8593 | pathogenic | -1.557 | Destabilizing | 0.98 | D | 0.725 | prob.delet. | None | None | None | None | N |
I/R | 0.8954 | likely_pathogenic | 0.8398 | pathogenic | -1.173 | Destabilizing | 0.98 | D | 0.727 | prob.delet. | None | None | None | None | N |
I/S | 0.5932 | likely_pathogenic | 0.5308 | ambiguous | -2.369 | Highly Destabilizing | 0.166 | N | 0.61 | neutral | N | 0.51321655 | None | None | N |
I/T | 0.2384 | likely_benign | 0.2073 | benign | -2.055 | Highly Destabilizing | 0.837 | D | 0.558 | neutral | N | 0.456666392 | None | None | N |
I/V | 0.1142 | likely_benign | 0.1162 | benign | -1.221 | Destabilizing | 0.028 | N | 0.173 | neutral | N | 0.480104054 | None | None | N |
I/W | 0.9578 | likely_pathogenic | 0.9525 | pathogenic | -1.54 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | N |
I/Y | 0.9154 | likely_pathogenic | 0.8962 | pathogenic | -1.248 | Destabilizing | 0.923 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.