Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5737 | 17434;17435;17436 | chr2:178731557;178731556;178731555 | chr2:179596284;179596283;179596282 |
N2AB | 5420 | 16483;16484;16485 | chr2:178731557;178731556;178731555 | chr2:179596284;179596283;179596282 |
N2A | 4493 | 13702;13703;13704 | chr2:178731557;178731556;178731555 | chr2:179596284;179596283;179596282 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs575592774 | 0.718 | 0.985 | N | 0.375 | 0.189 | 0.43656330218 | gnomAD-2.1.1 | 8.18E-06 | None | None | None | None | N | None | 1.29786E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs575592774 | 0.718 | 0.985 | N | 0.375 | 0.189 | 0.43656330218 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 9.66E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07641E-04 | 0 |
E/K | rs575592774 | 0.718 | 0.985 | N | 0.375 | 0.189 | 0.43656330218 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
E/K | rs575592774 | 0.718 | 0.985 | N | 0.375 | 0.189 | 0.43656330218 | gnomAD-4.0.0 | 8.08404E-06 | None | None | None | None | N | None | 6.69057E-05 | 0 | None | 0 | 0 | None | 1.56745E-05 | 0 | 5.09997E-06 | 1.10468E-05 | 0 |
E/Q | rs575592774 | 0.115 | 0.983 | N | 0.397 | 0.179 | 0.352476196916 | gnomAD-4.0.0 | 6.86854E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.66412E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1732 | likely_benign | 0.1558 | benign | -0.274 | Destabilizing | 0.826 | D | 0.343 | neutral | N | 0.494277612 | None | None | N |
E/C | 0.888 | likely_pathogenic | 0.8655 | pathogenic | -0.147 | Destabilizing | 0.999 | D | 0.369 | neutral | None | None | None | None | N |
E/D | 0.1193 | likely_benign | 0.1277 | benign | -0.377 | Destabilizing | 0.015 | N | 0.124 | neutral | N | 0.482756722 | None | None | N |
E/F | 0.7974 | likely_pathogenic | 0.7692 | pathogenic | -0.003 | Destabilizing | 0.991 | D | 0.392 | neutral | None | None | None | None | N |
E/G | 0.1875 | likely_benign | 0.1695 | benign | -0.487 | Destabilizing | 0.92 | D | 0.375 | neutral | D | 0.52965388 | None | None | N |
E/H | 0.5028 | ambiguous | 0.4538 | ambiguous | 0.346 | Stabilizing | 0.997 | D | 0.396 | neutral | None | None | None | None | N |
E/I | 0.4313 | ambiguous | 0.3955 | ambiguous | 0.254 | Stabilizing | 0.321 | N | 0.3 | neutral | None | None | None | None | N |
E/K | 0.1965 | likely_benign | 0.1512 | benign | 0.416 | Stabilizing | 0.985 | D | 0.375 | neutral | N | 0.510755901 | None | None | N |
E/L | 0.477 | ambiguous | 0.4449 | ambiguous | 0.254 | Stabilizing | 0.884 | D | 0.401 | neutral | None | None | None | None | N |
E/M | 0.5682 | likely_pathogenic | 0.5312 | ambiguous | 0.19 | Stabilizing | 0.998 | D | 0.381 | neutral | None | None | None | None | N |
E/N | 0.267 | likely_benign | 0.2535 | benign | -0.08 | Destabilizing | 0.939 | D | 0.377 | neutral | None | None | None | None | N |
E/P | 0.6719 | likely_pathogenic | 0.5919 | pathogenic | 0.099 | Stabilizing | 0.997 | D | 0.377 | neutral | None | None | None | None | N |
E/Q | 0.1479 | likely_benign | 0.1324 | benign | -0.011 | Destabilizing | 0.983 | D | 0.397 | neutral | N | 0.493346363 | None | None | N |
E/R | 0.3171 | likely_benign | 0.2511 | benign | 0.691 | Stabilizing | 0.991 | D | 0.379 | neutral | None | None | None | None | N |
E/S | 0.1993 | likely_benign | 0.1872 | benign | -0.204 | Destabilizing | 0.884 | D | 0.347 | neutral | None | None | None | None | N |
E/T | 0.2303 | likely_benign | 0.2103 | benign | -0.019 | Destabilizing | 0.17 | N | 0.182 | neutral | None | None | None | None | N |
E/V | 0.2551 | likely_benign | 0.2302 | benign | 0.099 | Stabilizing | 0.704 | D | 0.372 | neutral | N | 0.513142335 | None | None | N |
E/W | 0.9344 | likely_pathogenic | 0.9177 | pathogenic | 0.182 | Stabilizing | 0.999 | D | 0.498 | neutral | None | None | None | None | N |
E/Y | 0.6924 | likely_pathogenic | 0.6469 | pathogenic | 0.259 | Stabilizing | 0.997 | D | 0.396 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.