Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5746 | 17461;17462;17463 | chr2:178731530;178731529;178731528 | chr2:179596257;179596256;179596255 |
N2AB | 5429 | 16510;16511;16512 | chr2:178731530;178731529;178731528 | chr2:179596257;179596256;179596255 |
N2A | 4502 | 13729;13730;13731 | chr2:178731530;178731529;178731528 | chr2:179596257;179596256;179596255 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | rs775732793 | 0.199 | 0.863 | N | 0.397 | 0.176 | 0.451213972277 | gnomAD-2.1.1 | 2.87E-05 | None | None | None | None | N | None | 0 | 8.52E-05 | None | 0 | 0 | None | 0 | None | 2.00674E-04 | 0 | 0 |
T/R | rs775732793 | 0.199 | 0.863 | N | 0.397 | 0.176 | 0.451213972277 | gnomAD-3.1.2 | 6.57E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.41442E-04 | 0 | 0 | 0 | 0 |
T/R | rs775732793 | 0.199 | 0.863 | N | 0.397 | 0.176 | 0.451213972277 | gnomAD-4.0.0 | 1.61184E-05 | None | None | None | None | N | None | 0 | 5.00634E-05 | None | 0 | 0 | None | 3.28279E-04 | 0 | 1.69564E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0832 | likely_benign | 0.079 | benign | -0.428 | Destabilizing | 0.27 | N | 0.285 | neutral | N | 0.444300756 | None | None | N |
T/C | 0.5015 | ambiguous | 0.4373 | ambiguous | -0.218 | Destabilizing | 0.995 | D | 0.357 | neutral | None | None | None | None | N |
T/D | 0.3857 | ambiguous | 0.305 | benign | 0.395 | Stabilizing | 0.007 | N | 0.205 | neutral | None | None | None | None | N |
T/E | 0.2857 | likely_benign | 0.2255 | benign | 0.308 | Stabilizing | 0.031 | N | 0.231 | neutral | None | None | None | None | N |
T/F | 0.229 | likely_benign | 0.1902 | benign | -1.043 | Destabilizing | 0.893 | D | 0.369 | neutral | None | None | None | None | N |
T/G | 0.2898 | likely_benign | 0.2552 | benign | -0.514 | Destabilizing | 0.704 | D | 0.329 | neutral | None | None | None | None | N |
T/H | 0.2477 | likely_benign | 0.2081 | benign | -0.89 | Destabilizing | 0.981 | D | 0.339 | neutral | None | None | None | None | N |
T/I | 0.1693 | likely_benign | 0.1438 | benign | -0.323 | Destabilizing | 0.473 | N | 0.371 | neutral | N | 0.455758247 | None | None | N |
T/K | 0.1735 | likely_benign | 0.1429 | benign | -0.179 | Destabilizing | 0.642 | D | 0.313 | neutral | N | 0.488763609 | None | None | N |
T/L | 0.1085 | likely_benign | 0.0964 | benign | -0.323 | Destabilizing | 0.007 | N | 0.22 | neutral | None | None | None | None | N |
T/M | 0.0863 | likely_benign | 0.086 | benign | -0.05 | Destabilizing | 0.893 | D | 0.363 | neutral | None | None | None | None | N |
T/N | 0.1238 | likely_benign | 0.1085 | benign | 0.044 | Stabilizing | 0.704 | D | 0.201 | neutral | None | None | None | None | N |
T/P | 0.1366 | likely_benign | 0.1243 | benign | -0.333 | Destabilizing | 0.006 | N | 0.217 | neutral | N | 0.448647783 | None | None | N |
T/Q | 0.2036 | likely_benign | 0.1743 | benign | -0.2 | Destabilizing | 0.704 | D | 0.391 | neutral | None | None | None | None | N |
T/R | 0.1399 | likely_benign | 0.1162 | benign | 0.008 | Stabilizing | 0.863 | D | 0.397 | neutral | N | 0.447629063 | None | None | N |
T/S | 0.109 | likely_benign | 0.0987 | benign | -0.195 | Destabilizing | 0.065 | N | 0.131 | neutral | N | 0.389444764 | None | None | N |
T/V | 0.1395 | likely_benign | 0.1192 | benign | -0.333 | Destabilizing | 0.543 | D | 0.192 | neutral | None | None | None | None | N |
T/W | 0.5563 | ambiguous | 0.4981 | ambiguous | -1.032 | Destabilizing | 0.995 | D | 0.419 | neutral | None | None | None | None | N |
T/Y | 0.2654 | likely_benign | 0.2284 | benign | -0.737 | Destabilizing | 0.981 | D | 0.358 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.