Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5750 | 17473;17474;17475 | chr2:178731518;178731517;178731516 | chr2:179596245;179596244;179596243 |
N2AB | 5433 | 16522;16523;16524 | chr2:178731518;178731517;178731516 | chr2:179596245;179596244;179596243 |
N2A | 4506 | 13741;13742;13743 | chr2:178731518;178731517;178731516 | chr2:179596245;179596244;179596243 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | None | None | 0.998 | D | 0.589 | 0.51 | 0.48512917806 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3593 | ambiguous | 0.3587 | ambiguous | -0.78 | Destabilizing | 0.927 | D | 0.463 | neutral | None | None | None | None | N |
Q/C | 0.7704 | likely_pathogenic | 0.749 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | N |
Q/D | 0.572 | likely_pathogenic | 0.5521 | ambiguous | -0.082 | Destabilizing | 0.939 | D | 0.416 | neutral | None | None | None | None | N |
Q/E | 0.0951 | likely_benign | 0.0931 | benign | 0.032 | Stabilizing | 0.906 | D | 0.459 | neutral | N | 0.483878731 | None | None | N |
Q/F | 0.749 | likely_pathogenic | 0.7488 | pathogenic | -0.384 | Destabilizing | 0.991 | D | 0.622 | neutral | None | None | None | None | N |
Q/G | 0.4762 | ambiguous | 0.4719 | ambiguous | -1.142 | Destabilizing | 0.969 | D | 0.538 | neutral | None | None | None | None | N |
Q/H | 0.2603 | likely_benign | 0.2619 | benign | -0.743 | Destabilizing | 0.994 | D | 0.515 | neutral | N | 0.517263372 | None | None | N |
Q/I | 0.4365 | ambiguous | 0.4264 | ambiguous | 0.149 | Stabilizing | 0.939 | D | 0.564 | neutral | None | None | None | None | N |
Q/K | 0.1289 | likely_benign | 0.1218 | benign | -0.176 | Destabilizing | 0.959 | D | 0.458 | neutral | N | 0.495301115 | None | None | N |
Q/L | 0.1893 | likely_benign | 0.1918 | benign | 0.149 | Stabilizing | 0.068 | N | 0.404 | neutral | N | 0.516916656 | None | None | N |
Q/M | 0.4775 | ambiguous | 0.4715 | ambiguous | 0.496 | Stabilizing | 0.736 | D | 0.355 | neutral | None | None | None | None | N |
Q/N | 0.4638 | ambiguous | 0.4537 | ambiguous | -0.729 | Destabilizing | 0.293 | N | 0.355 | neutral | None | None | None | None | N |
Q/P | 0.6132 | likely_pathogenic | 0.6128 | pathogenic | -0.13 | Destabilizing | 0.998 | D | 0.589 | neutral | D | 0.535945134 | None | None | N |
Q/R | 0.1202 | likely_benign | 0.1167 | benign | -0.112 | Destabilizing | 0.979 | D | 0.471 | neutral | N | 0.513972351 | None | None | N |
Q/S | 0.3583 | ambiguous | 0.3345 | benign | -0.943 | Destabilizing | 0.969 | D | 0.437 | neutral | None | None | None | None | N |
Q/T | 0.2591 | likely_benign | 0.2386 | benign | -0.62 | Destabilizing | 0.969 | D | 0.469 | neutral | None | None | None | None | N |
Q/V | 0.2937 | likely_benign | 0.2885 | benign | -0.13 | Destabilizing | 0.939 | D | 0.525 | neutral | None | None | None | None | N |
Q/W | 0.6124 | likely_pathogenic | 0.6301 | pathogenic | -0.178 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
Q/Y | 0.5446 | ambiguous | 0.549 | ambiguous | 0.016 | Stabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.