Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5752 | 17479;17480;17481 | chr2:178731512;178731511;178731510 | chr2:179596239;179596238;179596237 |
N2AB | 5435 | 16528;16529;16530 | chr2:178731512;178731511;178731510 | chr2:179596239;179596238;179596237 |
N2A | 4508 | 13747;13748;13749 | chr2:178731512;178731511;178731510 | chr2:179596239;179596238;179596237 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs774619432 | -1.163 | 0.001 | N | 0.176 | 0.098 | 0.139678290688 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 1.78E-05 | 0 |
T/A | rs774619432 | -1.163 | 0.001 | N | 0.176 | 0.098 | 0.139678290688 | gnomAD-4.0.0 | 1.27373E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57829E-06 | 7.16558E-05 | 0 |
T/I | None | None | 0.002 | N | 0.341 | 0.203 | 0.314417295294 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0743 | likely_benign | 0.074 | benign | -1.026 | Destabilizing | 0.001 | N | 0.176 | neutral | N | 0.443267046 | None | None | N |
T/C | 0.3745 | ambiguous | 0.3424 | ambiguous | -0.674 | Destabilizing | 0.94 | D | 0.498 | neutral | None | None | None | None | N |
T/D | 0.3713 | ambiguous | 0.3388 | benign | -0.504 | Destabilizing | 0.418 | N | 0.493 | neutral | None | None | None | None | N |
T/E | 0.2567 | likely_benign | 0.2291 | benign | -0.43 | Destabilizing | 0.418 | N | 0.453 | neutral | None | None | None | None | N |
T/F | 0.1624 | likely_benign | 0.1532 | benign | -0.799 | Destabilizing | 0.716 | D | 0.538 | neutral | None | None | None | None | N |
T/G | 0.2447 | likely_benign | 0.2356 | benign | -1.36 | Destabilizing | 0.001 | N | 0.347 | neutral | None | None | None | None | N |
T/H | 0.2197 | likely_benign | 0.2041 | benign | -1.499 | Destabilizing | 0.951 | D | 0.515 | neutral | None | None | None | None | N |
T/I | 0.1029 | likely_benign | 0.0927 | benign | -0.2 | Destabilizing | 0.002 | N | 0.341 | neutral | N | 0.482825512 | None | None | N |
T/K | 0.2041 | likely_benign | 0.1813 | benign | -0.748 | Destabilizing | 0.264 | N | 0.449 | neutral | None | None | None | None | N |
T/L | 0.0792 | likely_benign | 0.0757 | benign | -0.2 | Destabilizing | 0.049 | N | 0.429 | neutral | None | None | None | None | N |
T/M | 0.0812 | likely_benign | 0.0792 | benign | -0.02 | Destabilizing | 0.716 | D | 0.505 | neutral | None | None | None | None | N |
T/N | 0.1127 | likely_benign | 0.108 | benign | -0.892 | Destabilizing | 0.213 | N | 0.467 | neutral | N | 0.500640481 | None | None | N |
T/P | 0.2303 | likely_benign | 0.2575 | benign | -0.443 | Destabilizing | 0.523 | D | 0.537 | neutral | N | 0.501680631 | None | None | N |
T/Q | 0.1953 | likely_benign | 0.1829 | benign | -0.946 | Destabilizing | 0.716 | D | 0.527 | neutral | None | None | None | None | N |
T/R | 0.1561 | likely_benign | 0.1425 | benign | -0.628 | Destabilizing | 0.716 | D | 0.528 | neutral | None | None | None | None | N |
T/S | 0.0963 | likely_benign | 0.0947 | benign | -1.225 | Destabilizing | 0.007 | N | 0.209 | neutral | N | 0.481612003 | None | None | N |
T/V | 0.09 | likely_benign | 0.0819 | benign | -0.443 | Destabilizing | 0.004 | N | 0.194 | neutral | None | None | None | None | N |
T/W | 0.5257 | ambiguous | 0.5192 | ambiguous | -0.744 | Destabilizing | 0.983 | D | 0.554 | neutral | None | None | None | None | N |
T/Y | 0.2125 | likely_benign | 0.2017 | benign | -0.497 | Destabilizing | 0.836 | D | 0.524 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.