Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5753 | 17482;17483;17484 | chr2:178731509;178731508;178731507 | chr2:179596236;179596235;179596234 |
N2AB | 5436 | 16531;16532;16533 | chr2:178731509;178731508;178731507 | chr2:179596236;179596235;179596234 |
N2A | 4509 | 13750;13751;13752 | chr2:178731509;178731508;178731507 | chr2:179596236;179596235;179596234 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | None | None | 0.995 | D | 0.806 | 0.566 | 0.82834384376 | gnomAD-4.0.0 | 6.84338E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99543E-07 | 0 | 0 |
L/R | None | None | 0.984 | D | 0.813 | 0.628 | 0.813981597967 | gnomAD-4.0.0 | 6.84338E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99543E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7989 | likely_pathogenic | 0.8053 | pathogenic | -2.549 | Highly Destabilizing | 0.851 | D | 0.711 | prob.delet. | None | None | None | None | N |
L/C | 0.8226 | likely_pathogenic | 0.8083 | pathogenic | -1.687 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
L/D | 0.9979 | likely_pathogenic | 0.9975 | pathogenic | -2.696 | Highly Destabilizing | 0.996 | D | 0.843 | deleterious | None | None | None | None | N |
L/E | 0.9811 | likely_pathogenic | 0.9798 | pathogenic | -2.421 | Highly Destabilizing | 0.988 | D | 0.843 | deleterious | None | None | None | None | N |
L/F | 0.4874 | ambiguous | 0.4106 | ambiguous | -1.474 | Destabilizing | 0.976 | D | 0.759 | deleterious | None | None | None | None | N |
L/G | 0.9716 | likely_pathogenic | 0.9706 | pathogenic | -3.14 | Highly Destabilizing | 0.988 | D | 0.841 | deleterious | None | None | None | None | N |
L/H | 0.9674 | likely_pathogenic | 0.9597 | pathogenic | -2.631 | Highly Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
L/I | 0.0899 | likely_benign | 0.0843 | benign | -0.814 | Destabilizing | 0.034 | N | 0.299 | neutral | None | None | None | None | N |
L/K | 0.9812 | likely_pathogenic | 0.9785 | pathogenic | -1.753 | Destabilizing | 0.988 | D | 0.824 | deleterious | None | None | None | None | N |
L/M | 0.2016 | likely_benign | 0.192 | benign | -0.818 | Destabilizing | 0.968 | D | 0.733 | prob.delet. | D | 0.535771775 | None | None | N |
L/N | 0.9858 | likely_pathogenic | 0.9836 | pathogenic | -2.208 | Highly Destabilizing | 0.996 | D | 0.831 | deleterious | None | None | None | None | N |
L/P | 0.9804 | likely_pathogenic | 0.9784 | pathogenic | -1.377 | Destabilizing | 0.995 | D | 0.844 | deleterious | N | 0.483862875 | None | None | N |
L/Q | 0.9396 | likely_pathogenic | 0.9382 | pathogenic | -1.971 | Destabilizing | 0.995 | D | 0.806 | deleterious | D | 0.536118492 | None | None | N |
L/R | 0.9616 | likely_pathogenic | 0.9587 | pathogenic | -1.654 | Destabilizing | 0.984 | D | 0.813 | deleterious | D | 0.536118492 | None | None | N |
L/S | 0.9544 | likely_pathogenic | 0.9515 | pathogenic | -2.938 | Highly Destabilizing | 0.988 | D | 0.812 | deleterious | None | None | None | None | N |
L/T | 0.8085 | likely_pathogenic | 0.8041 | pathogenic | -2.505 | Highly Destabilizing | 0.919 | D | 0.759 | deleterious | None | None | None | None | N |
L/V | 0.0795 | likely_benign | 0.0787 | benign | -1.377 | Destabilizing | 0.011 | N | 0.283 | neutral | N | 0.367312558 | None | None | N |
L/W | 0.91 | likely_pathogenic | 0.8824 | pathogenic | -1.862 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
L/Y | 0.9337 | likely_pathogenic | 0.9061 | pathogenic | -1.578 | Destabilizing | 0.996 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.