Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5754 | 17485;17486;17487 | chr2:178731506;178731505;178731504 | chr2:179596233;179596232;179596231 |
N2AB | 5437 | 16534;16535;16536 | chr2:178731506;178731505;178731504 | chr2:179596233;179596232;179596231 |
N2A | 4510 | 13753;13754;13755 | chr2:178731506;178731505;178731504 | chr2:179596233;179596232;179596231 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs890346105 | None | 0.968 | N | 0.499 | 0.216 | 0.180583059064 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93199E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs890346105 | None | 0.968 | N | 0.499 | 0.216 | 0.180583059064 | gnomAD-4.0.0 | 6.5672E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.93648E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3471 | ambiguous | 0.313 | benign | -0.025 | Destabilizing | 0.702 | D | 0.542 | neutral | None | None | None | None | I |
K/C | 0.7252 | likely_pathogenic | 0.6674 | pathogenic | -0.326 | Destabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | I |
K/D | 0.6148 | likely_pathogenic | 0.5737 | pathogenic | 0.273 | Stabilizing | 0.976 | D | 0.523 | neutral | None | None | None | None | I |
K/E | 0.1561 | likely_benign | 0.1455 | benign | 0.298 | Stabilizing | 0.896 | D | 0.521 | neutral | N | 0.444899055 | None | None | I |
K/F | 0.7676 | likely_pathogenic | 0.7352 | pathogenic | -0.171 | Destabilizing | 0.988 | D | 0.605 | neutral | None | None | None | None | I |
K/G | 0.5359 | ambiguous | 0.4945 | ambiguous | -0.24 | Destabilizing | 0.919 | D | 0.529 | neutral | None | None | None | None | I |
K/H | 0.2884 | likely_benign | 0.27 | benign | -0.421 | Destabilizing | 0.997 | D | 0.568 | neutral | None | None | None | None | I |
K/I | 0.3825 | ambiguous | 0.3574 | ambiguous | 0.465 | Stabilizing | 0.261 | N | 0.385 | neutral | None | None | None | None | I |
K/L | 0.3897 | ambiguous | 0.3656 | ambiguous | 0.465 | Stabilizing | 0.851 | D | 0.516 | neutral | None | None | None | None | I |
K/M | 0.2573 | likely_benign | 0.2389 | benign | 0.17 | Stabilizing | 0.996 | D | 0.571 | neutral | N | 0.499672889 | None | None | I |
K/N | 0.4338 | ambiguous | 0.3968 | ambiguous | 0.172 | Stabilizing | 0.968 | D | 0.499 | neutral | N | 0.513588349 | None | None | I |
K/P | 0.9565 | likely_pathogenic | 0.9484 | pathogenic | 0.33 | Stabilizing | 0.996 | D | 0.581 | neutral | None | None | None | None | I |
K/Q | 0.114 | likely_benign | 0.1103 | benign | 0.037 | Stabilizing | 0.968 | D | 0.551 | neutral | N | 0.502024561 | None | None | I |
K/R | 0.0816 | likely_benign | 0.0792 | benign | 0.01 | Stabilizing | 0.059 | N | 0.151 | neutral | N | 0.499330973 | None | None | I |
K/S | 0.3777 | ambiguous | 0.3371 | benign | -0.378 | Destabilizing | 0.307 | N | 0.176 | neutral | None | None | None | None | I |
K/T | 0.1664 | likely_benign | 0.1495 | benign | -0.191 | Destabilizing | 0.896 | D | 0.54 | neutral | N | 0.473509808 | None | None | I |
K/V | 0.3602 | ambiguous | 0.3329 | benign | 0.33 | Stabilizing | 0.851 | D | 0.517 | neutral | None | None | None | None | I |
K/W | 0.7719 | likely_pathogenic | 0.7431 | pathogenic | -0.167 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | I |
K/Y | 0.6432 | likely_pathogenic | 0.6142 | pathogenic | 0.189 | Stabilizing | 0.996 | D | 0.597 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.