Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5758 | 17497;17498;17499 | chr2:178731494;178731493;178731492 | chr2:179596221;179596220;179596219 |
N2AB | 5441 | 16546;16547;16548 | chr2:178731494;178731493;178731492 | chr2:179596221;179596220;179596219 |
N2A | 4514 | 13765;13766;13767 | chr2:178731494;178731493;178731492 | chr2:179596221;179596220;179596219 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs778057891 | 0.117 | 0.998 | N | 0.636 | 0.486 | 0.448000600372 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/A | rs778057891 | 0.117 | 0.998 | N | 0.636 | 0.486 | 0.448000600372 | gnomAD-4.0.0 | 1.23959E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.6953E-06 | 0 | 0 |
P/L | None | None | 0.999 | N | 0.682 | 0.46 | 0.802788045409 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | None | None | 0.999 | N | 0.638 | 0.439 | 0.570999777189 | gnomAD-4.0.0 | 6.84308E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99518E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.6658 | likely_pathogenic | 0.6273 | pathogenic | -0.459 | Destabilizing | 0.998 | D | 0.636 | neutral | N | 0.494073348 | None | None | I |
P/C | 0.9777 | likely_pathogenic | 0.9685 | pathogenic | -0.639 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
P/D | 0.9015 | likely_pathogenic | 0.8679 | pathogenic | -0.237 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
P/E | 0.8772 | likely_pathogenic | 0.8399 | pathogenic | -0.351 | Destabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | I |
P/F | 0.9769 | likely_pathogenic | 0.9727 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
P/G | 0.8674 | likely_pathogenic | 0.8428 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | I |
P/H | 0.873 | likely_pathogenic | 0.8512 | pathogenic | -0.174 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
P/I | 0.9585 | likely_pathogenic | 0.9491 | pathogenic | -0.283 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
P/K | 0.9406 | likely_pathogenic | 0.9187 | pathogenic | -0.423 | Destabilizing | 0.994 | D | 0.631 | neutral | None | None | None | None | I |
P/L | 0.7787 | likely_pathogenic | 0.7484 | pathogenic | -0.283 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | N | 0.486693515 | None | None | I |
P/M | 0.9513 | likely_pathogenic | 0.9416 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
P/N | 0.8753 | likely_pathogenic | 0.8564 | pathogenic | -0.151 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
P/Q | 0.8277 | likely_pathogenic | 0.802 | pathogenic | -0.385 | Destabilizing | 0.999 | D | 0.637 | neutral | N | 0.485969045 | None | None | I |
P/R | 0.8697 | likely_pathogenic | 0.8368 | pathogenic | 0.07 | Stabilizing | 0.884 | D | 0.563 | neutral | N | 0.486693515 | None | None | I |
P/S | 0.7849 | likely_pathogenic | 0.7461 | pathogenic | -0.511 | Destabilizing | 0.999 | D | 0.627 | neutral | N | 0.501074787 | None | None | I |
P/T | 0.7842 | likely_pathogenic | 0.7401 | pathogenic | -0.523 | Destabilizing | 0.999 | D | 0.638 | neutral | N | 0.52066625 | None | None | I |
P/V | 0.9034 | likely_pathogenic | 0.8821 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
P/W | 0.9892 | likely_pathogenic | 0.9852 | pathogenic | -0.785 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
P/Y | 0.9685 | likely_pathogenic | 0.9603 | pathogenic | -0.486 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.