Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5763 | 17512;17513;17514 | chr2:178731479;178731478;178731477 | chr2:179596206;179596205;179596204 |
N2AB | 5446 | 16561;16562;16563 | chr2:178731479;178731478;178731477 | chr2:179596206;179596205;179596204 |
N2A | 4519 | 13780;13781;13782 | chr2:178731479;178731478;178731477 | chr2:179596206;179596205;179596204 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/R | rs897659304 | None | 0.999 | D | 0.866 | 0.951 | 0.939118346112 | gnomAD-4.0.0 | 1.59156E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85847E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.9948 | likely_pathogenic | 0.9939 | pathogenic | -3.266 | Highly Destabilizing | 0.992 | D | 0.847 | deleterious | None | None | None | None | N |
W/C | 0.9961 | likely_pathogenic | 0.9956 | pathogenic | -1.897 | Destabilizing | 1.0 | D | 0.838 | deleterious | D | 0.655936028 | None | None | N |
W/D | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -3.565 | Highly Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
W/E | 0.9996 | likely_pathogenic | 0.9995 | pathogenic | -3.459 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
W/F | 0.5757 | likely_pathogenic | 0.532 | ambiguous | -1.976 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
W/G | 0.9861 | likely_pathogenic | 0.9838 | pathogenic | -3.497 | Highly Destabilizing | 0.217 | N | 0.704 | prob.neutral | D | 0.671753584 | None | None | N |
W/H | 0.9976 | likely_pathogenic | 0.997 | pathogenic | -2.296 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
W/I | 0.9671 | likely_pathogenic | 0.9618 | pathogenic | -2.371 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
W/K | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -2.603 | Highly Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
W/L | 0.9132 | likely_pathogenic | 0.9104 | pathogenic | -2.371 | Highly Destabilizing | 0.999 | D | 0.843 | deleterious | D | 0.671753584 | None | None | N |
W/M | 0.9853 | likely_pathogenic | 0.9838 | pathogenic | -1.816 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
W/N | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -3.297 | Highly Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
W/P | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -2.699 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
W/Q | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -3.168 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
W/R | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -2.238 | Highly Destabilizing | 0.999 | D | 0.866 | deleterious | D | 0.671955389 | None | None | N |
W/S | 0.9939 | likely_pathogenic | 0.9933 | pathogenic | -3.451 | Highly Destabilizing | 0.997 | D | 0.847 | deleterious | D | 0.671955389 | None | None | N |
W/T | 0.9962 | likely_pathogenic | 0.9954 | pathogenic | -3.277 | Highly Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
W/V | 0.9686 | likely_pathogenic | 0.9662 | pathogenic | -2.699 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
W/Y | 0.9124 | likely_pathogenic | 0.8998 | pathogenic | -1.852 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.