Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5769 | 17530;17531;17532 | chr2:178731461;178731460;178731459 | chr2:179596188;179596187;179596186 |
N2AB | 5452 | 16579;16580;16581 | chr2:178731461;178731460;178731459 | chr2:179596188;179596187;179596186 |
N2A | 4525 | 13798;13799;13800 | chr2:178731461;178731460;178731459 | chr2:179596188;179596187;179596186 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs756902467 | -0.167 | 0.625 | D | 0.347 | 0.279 | 0.430010490656 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/A | rs756902467 | -0.167 | 0.625 | D | 0.347 | 0.279 | 0.430010490656 | gnomAD-4.0.0 | 6.8423E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15937E-05 | 0 |
E/G | None | None | 0.801 | N | 0.373 | 0.436 | 0.534093007224 | gnomAD-4.0.0 | 6.8423E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99467E-07 | 0 | 0 |
E/K | None | None | 0.051 | N | 0.237 | 0.188 | 0.311079019809 | gnomAD-4.0.0 | 1.36845E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79893E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.142 | likely_benign | 0.1348 | benign | -0.415 | Destabilizing | 0.625 | D | 0.347 | neutral | D | 0.532712828 | None | None | N |
E/C | 0.7794 | likely_pathogenic | 0.7605 | pathogenic | -0.113 | Destabilizing | 0.998 | D | 0.354 | neutral | None | None | None | None | N |
E/D | 0.1106 | likely_benign | 0.1115 | benign | -0.427 | Destabilizing | 0.005 | N | 0.209 | neutral | N | 0.488010188 | None | None | N |
E/F | 0.5869 | likely_pathogenic | 0.5511 | ambiguous | -0.216 | Destabilizing | 0.904 | D | 0.361 | neutral | None | None | None | None | N |
E/G | 0.178 | likely_benign | 0.1689 | benign | -0.637 | Destabilizing | 0.801 | D | 0.373 | neutral | N | 0.509156317 | None | None | N |
E/H | 0.3815 | ambiguous | 0.3677 | ambiguous | -0.011 | Destabilizing | 0.037 | N | 0.221 | neutral | None | None | None | None | N |
E/I | 0.2273 | likely_benign | 0.201 | benign | 0.141 | Stabilizing | 0.974 | D | 0.369 | neutral | None | None | None | None | N |
E/K | 0.1195 | likely_benign | 0.1144 | benign | 0.219 | Stabilizing | 0.051 | N | 0.237 | neutral | N | 0.491807567 | None | None | N |
E/L | 0.3044 | likely_benign | 0.2852 | benign | 0.141 | Stabilizing | 0.842 | D | 0.39 | neutral | None | None | None | None | N |
E/M | 0.3462 | ambiguous | 0.3224 | benign | 0.217 | Stabilizing | 0.998 | D | 0.339 | neutral | None | None | None | None | N |
E/N | 0.2024 | likely_benign | 0.1915 | benign | -0.141 | Destabilizing | 0.728 | D | 0.333 | neutral | None | None | None | None | N |
E/P | 0.3906 | ambiguous | 0.3556 | ambiguous | -0.024 | Destabilizing | 0.974 | D | 0.373 | neutral | None | None | None | None | N |
E/Q | 0.1372 | likely_benign | 0.1368 | benign | -0.093 | Destabilizing | 0.801 | D | 0.391 | neutral | N | 0.51126012 | None | None | N |
E/R | 0.2122 | likely_benign | 0.2021 | benign | 0.468 | Stabilizing | 0.728 | D | 0.365 | neutral | None | None | None | None | N |
E/S | 0.1887 | likely_benign | 0.1804 | benign | -0.309 | Destabilizing | 0.842 | D | 0.329 | neutral | None | None | None | None | N |
E/T | 0.1863 | likely_benign | 0.1703 | benign | -0.129 | Destabilizing | 0.842 | D | 0.396 | neutral | None | None | None | None | N |
E/V | 0.1485 | likely_benign | 0.1353 | benign | -0.024 | Destabilizing | 0.801 | D | 0.363 | neutral | N | 0.509972041 | None | None | N |
E/W | 0.828 | likely_pathogenic | 0.8173 | pathogenic | -0.045 | Destabilizing | 0.998 | D | 0.348 | neutral | None | None | None | None | N |
E/Y | 0.4644 | ambiguous | 0.4343 | ambiguous | 0.03 | Stabilizing | 0.067 | N | 0.268 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.