Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5778 | 17557;17558;17559 | chr2:178731434;178731433;178731432 | chr2:179596161;179596160;179596159 |
N2AB | 5461 | 16606;16607;16608 | chr2:178731434;178731433;178731432 | chr2:179596161;179596160;179596159 |
N2A | 4534 | 13825;13826;13827 | chr2:178731434;178731433;178731432 | chr2:179596161;179596160;179596159 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/R | None | None | 0.784 | N | 0.555 | 0.42 | 0.639888206178 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
M/V | None | None | 0.003 | N | 0.047 | 0.125 | 0.428747304603 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.5958 | likely_pathogenic | 0.6108 | pathogenic | -2.291 | Highly Destabilizing | 0.003 | N | 0.165 | neutral | None | None | None | None | N |
M/C | 0.8064 | likely_pathogenic | 0.8084 | pathogenic | -1.653 | Destabilizing | 0.981 | D | 0.522 | neutral | None | None | None | None | N |
M/D | 0.9543 | likely_pathogenic | 0.9544 | pathogenic | -1.123 | Destabilizing | 0.828 | D | 0.621 | neutral | None | None | None | None | N |
M/E | 0.729 | likely_pathogenic | 0.7282 | pathogenic | -0.991 | Destabilizing | 0.704 | D | 0.542 | neutral | None | None | None | None | N |
M/F | 0.4456 | ambiguous | 0.4509 | ambiguous | -0.913 | Destabilizing | 0.704 | D | 0.361 | neutral | None | None | None | None | N |
M/G | 0.8129 | likely_pathogenic | 0.827 | pathogenic | -2.708 | Highly Destabilizing | 0.329 | N | 0.491 | neutral | None | None | None | None | N |
M/H | 0.7289 | likely_pathogenic | 0.7372 | pathogenic | -1.836 | Destabilizing | 0.981 | D | 0.577 | neutral | None | None | None | None | N |
M/I | 0.3581 | ambiguous | 0.3658 | ambiguous | -1.14 | Destabilizing | 0.001 | N | 0.06 | neutral | N | 0.364667403 | None | None | N |
M/K | 0.2888 | likely_benign | 0.3136 | benign | -1.097 | Destabilizing | 0.642 | D | 0.469 | neutral | N | 0.49885097 | None | None | N |
M/L | 0.176 | likely_benign | 0.1838 | benign | -1.14 | Destabilizing | 0.001 | N | 0.044 | neutral | N | 0.428372164 | None | None | N |
M/N | 0.7254 | likely_pathogenic | 0.7286 | pathogenic | -1.163 | Destabilizing | 0.828 | D | 0.638 | neutral | None | None | None | None | N |
M/P | 0.9495 | likely_pathogenic | 0.9522 | pathogenic | -1.501 | Destabilizing | 0.828 | D | 0.607 | neutral | None | None | None | None | N |
M/Q | 0.3946 | ambiguous | 0.4089 | ambiguous | -1.061 | Destabilizing | 0.828 | D | 0.466 | neutral | None | None | None | None | N |
M/R | 0.3231 | likely_benign | 0.3527 | ambiguous | -0.806 | Destabilizing | 0.784 | D | 0.555 | neutral | N | 0.469664213 | None | None | N |
M/S | 0.6554 | likely_pathogenic | 0.6696 | pathogenic | -1.833 | Destabilizing | 0.329 | N | 0.399 | neutral | None | None | None | None | N |
M/T | 0.386 | ambiguous | 0.3855 | ambiguous | -1.576 | Destabilizing | 0.425 | N | 0.363 | neutral | N | 0.427316159 | None | None | N |
M/V | 0.1398 | likely_benign | 0.1474 | benign | -1.501 | Destabilizing | 0.003 | N | 0.047 | neutral | N | 0.427406585 | None | None | N |
M/W | 0.7838 | likely_pathogenic | 0.7817 | pathogenic | -0.961 | Destabilizing | 0.995 | D | 0.514 | neutral | None | None | None | None | N |
M/Y | 0.7029 | likely_pathogenic | 0.6936 | pathogenic | -1.025 | Destabilizing | 0.936 | D | 0.576 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.