Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5780 | 17563;17564;17565 | chr2:178731428;178731427;178731426 | chr2:179596155;179596154;179596153 |
N2AB | 5463 | 16612;16613;16614 | chr2:178731428;178731427;178731426 | chr2:179596155;179596154;179596153 |
N2A | 4536 | 13831;13832;13833 | chr2:178731428;178731427;178731426 | chr2:179596155;179596154;179596153 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs201482215 | -1.012 | 0.998 | N | 0.783 | 0.459 | None | gnomAD-2.1.1 | 1.46323E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 8.79297E-04 | 1.24916E-04 | 4.20875E-04 |
F/S | rs201482215 | -1.012 | 0.998 | N | 0.783 | 0.459 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 2.8238E-04 | 0 | 1.47E-05 | 0 | 0 |
F/S | rs201482215 | -1.012 | 0.998 | N | 0.783 | 0.459 | None | gnomAD-4.0.0 | 5.82521E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.03083E-03 | 0 | 1.10189E-05 | 0 | 2.40184E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8712 | likely_pathogenic | 0.8489 | pathogenic | -2.076 | Highly Destabilizing | 0.996 | D | 0.743 | deleterious | None | None | None | None | N |
F/C | 0.7692 | likely_pathogenic | 0.7382 | pathogenic | -1.046 | Destabilizing | 1.0 | D | 0.802 | deleterious | N | 0.510153367 | None | None | N |
F/D | 0.9731 | likely_pathogenic | 0.9637 | pathogenic | -0.603 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
F/E | 0.9675 | likely_pathogenic | 0.9591 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
F/G | 0.9572 | likely_pathogenic | 0.9488 | pathogenic | -2.397 | Highly Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
F/H | 0.8429 | likely_pathogenic | 0.8074 | pathogenic | -0.743 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
F/I | 0.5446 | ambiguous | 0.5272 | ambiguous | -1.134 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | N | 0.486769193 | None | None | N |
F/K | 0.9686 | likely_pathogenic | 0.9621 | pathogenic | -1.085 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
F/L | 0.9447 | likely_pathogenic | 0.9425 | pathogenic | -1.134 | Destabilizing | 0.989 | D | 0.649 | neutral | N | 0.521802401 | None | None | N |
F/M | 0.7391 | likely_pathogenic | 0.7259 | pathogenic | -0.822 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
F/N | 0.9097 | likely_pathogenic | 0.8913 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
F/P | 0.9983 | likely_pathogenic | 0.9978 | pathogenic | -1.439 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
F/Q | 0.9465 | likely_pathogenic | 0.9366 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
F/R | 0.9298 | likely_pathogenic | 0.9144 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
F/S | 0.775 | likely_pathogenic | 0.7398 | pathogenic | -1.884 | Destabilizing | 0.998 | D | 0.783 | deleterious | N | 0.521282326 | None | None | N |
F/T | 0.8006 | likely_pathogenic | 0.7648 | pathogenic | -1.726 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
F/V | 0.4991 | ambiguous | 0.4848 | ambiguous | -1.439 | Destabilizing | 0.989 | D | 0.72 | prob.delet. | N | 0.517548587 | None | None | N |
F/W | 0.6309 | likely_pathogenic | 0.595 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
F/Y | 0.2458 | likely_benign | 0.221 | benign | -0.619 | Destabilizing | 0.333 | N | 0.304 | neutral | N | 0.479531704 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.