Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5781 | 17566;17567;17568 | chr2:178731425;178731424;178731423 | chr2:179596152;179596151;179596150 |
N2AB | 5464 | 16615;16616;16617 | chr2:178731425;178731424;178731423 | chr2:179596152;179596151;179596150 |
N2A | 4537 | 13834;13835;13836 | chr2:178731425;178731424;178731423 | chr2:179596152;179596151;179596150 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1414405507 | -0.312 | 0.801 | N | 0.434 | 0.361 | 0.42573502686 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
E/K | rs1400453149 | 0.815 | 0.005 | N | 0.124 | 0.246 | 0.236890367714 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 6.4433E-04 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1400453149 | 0.815 | 0.005 | N | 0.124 | 0.246 | 0.236890367714 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93125E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1400453149 | 0.815 | 0.005 | N | 0.124 | 0.246 | 0.236890367714 | gnomAD-4.0.0 | 6.5741E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.93125E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | None | None | 0.801 | D | 0.343 | 0.168 | 0.283761946502 | gnomAD-4.0.0 | 1.59125E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85814E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.199 | likely_benign | 0.1951 | benign | -0.5 | Destabilizing | 0.454 | N | 0.384 | neutral | D | 0.526672289 | None | None | I |
E/C | 0.8348 | likely_pathogenic | 0.8158 | pathogenic | -0.229 | Destabilizing | 0.998 | D | 0.41 | neutral | None | None | None | None | I |
E/D | 0.1476 | likely_benign | 0.1504 | benign | -0.315 | Destabilizing | 0.801 | D | 0.347 | neutral | N | 0.500755125 | None | None | I |
E/F | 0.7327 | likely_pathogenic | 0.7167 | pathogenic | -0.218 | Destabilizing | 0.949 | D | 0.389 | neutral | None | None | None | None | I |
E/G | 0.2229 | likely_benign | 0.2195 | benign | -0.701 | Destabilizing | 0.801 | D | 0.434 | neutral | N | 0.485798596 | None | None | I |
E/H | 0.3848 | ambiguous | 0.3706 | ambiguous | 0.125 | Stabilizing | 0.991 | D | 0.289 | neutral | None | None | None | None | I |
E/I | 0.3222 | likely_benign | 0.3008 | benign | 0.001 | Stabilizing | 0.728 | D | 0.387 | neutral | None | None | None | None | I |
E/K | 0.1427 | likely_benign | 0.1341 | benign | 0.283 | Stabilizing | 0.005 | N | 0.124 | neutral | N | 0.501139127 | None | None | I |
E/L | 0.4097 | ambiguous | 0.3912 | ambiguous | 0.001 | Stabilizing | 0.728 | D | 0.415 | neutral | None | None | None | None | I |
E/M | 0.4723 | ambiguous | 0.4533 | ambiguous | 0.033 | Stabilizing | 0.974 | D | 0.389 | neutral | None | None | None | None | I |
E/N | 0.2736 | likely_benign | 0.2721 | benign | -0.199 | Destabilizing | 0.842 | D | 0.31 | neutral | None | None | None | None | I |
E/P | 0.9204 | likely_pathogenic | 0.9131 | pathogenic | -0.147 | Destabilizing | 0.974 | D | 0.333 | neutral | None | None | None | None | I |
E/Q | 0.1116 | likely_benign | 0.1077 | benign | -0.132 | Destabilizing | 0.801 | D | 0.343 | neutral | D | 0.526672289 | None | None | I |
E/R | 0.2149 | likely_benign | 0.2062 | benign | 0.554 | Stabilizing | 0.728 | D | 0.339 | neutral | None | None | None | None | I |
E/S | 0.2198 | likely_benign | 0.2168 | benign | -0.334 | Destabilizing | 0.842 | D | 0.342 | neutral | None | None | None | None | I |
E/T | 0.239 | likely_benign | 0.2247 | benign | -0.156 | Destabilizing | 0.842 | D | 0.353 | neutral | None | None | None | None | I |
E/V | 0.2064 | likely_benign | 0.1932 | benign | -0.147 | Destabilizing | 0.012 | N | 0.268 | neutral | N | 0.505566299 | None | None | I |
E/W | 0.8567 | likely_pathogenic | 0.8475 | pathogenic | -0.002 | Destabilizing | 0.998 | D | 0.496 | neutral | None | None | None | None | I |
E/Y | 0.5843 | likely_pathogenic | 0.576 | pathogenic | 0.035 | Stabilizing | 0.974 | D | 0.393 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.