Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5782 | 17569;17570;17571 | chr2:178731422;178731421;178731420 | chr2:179596149;179596148;179596147 |
N2AB | 5465 | 16618;16619;16620 | chr2:178731422;178731421;178731420 | chr2:179596149;179596148;179596147 |
N2A | 4538 | 13837;13838;13839 | chr2:178731422;178731421;178731420 | chr2:179596149;179596148;179596147 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs535281449 | 0.343 | 0.98 | N | 0.385 | 0.19 | 0.177238962908 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
N/S | rs1423767140 | 0.246 | 0.659 | N | 0.222 | 0.165 | 0.128392430309 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
N/S | rs1423767140 | 0.246 | 0.659 | N | 0.222 | 0.165 | 0.128392430309 | gnomAD-4.0.0 | 1.59123E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85812E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3755 | ambiguous | 0.3627 | ambiguous | -0.057 | Destabilizing | 0.971 | D | 0.429 | neutral | None | None | None | None | N |
N/C | 0.506 | ambiguous | 0.4914 | ambiguous | 0.105 | Stabilizing | 1.0 | D | 0.524 | neutral | None | None | None | None | N |
N/D | 0.1024 | likely_benign | 0.0996 | benign | 0.084 | Stabilizing | 0.135 | N | 0.183 | neutral | N | 0.464537169 | None | None | N |
N/E | 0.3223 | likely_benign | 0.3044 | benign | 0.024 | Stabilizing | 0.971 | D | 0.359 | neutral | None | None | None | None | N |
N/F | 0.7638 | likely_pathogenic | 0.7546 | pathogenic | -0.659 | Destabilizing | 0.998 | D | 0.488 | neutral | None | None | None | None | N |
N/G | 0.2807 | likely_benign | 0.2748 | benign | -0.152 | Destabilizing | 0.985 | D | 0.371 | neutral | None | None | None | None | N |
N/H | 0.1475 | likely_benign | 0.1436 | benign | -0.161 | Destabilizing | 0.265 | N | 0.268 | neutral | N | 0.512389831 | None | None | N |
N/I | 0.613 | likely_pathogenic | 0.6181 | pathogenic | 0.089 | Stabilizing | 0.997 | D | 0.487 | neutral | N | 0.461883859 | None | None | N |
N/K | 0.2735 | likely_benign | 0.2566 | benign | 0.087 | Stabilizing | 0.98 | D | 0.385 | neutral | N | 0.497612379 | None | None | N |
N/L | 0.5319 | ambiguous | 0.5251 | ambiguous | 0.089 | Stabilizing | 0.998 | D | 0.455 | neutral | None | None | None | None | N |
N/M | 0.5304 | ambiguous | 0.5226 | ambiguous | 0.086 | Stabilizing | 1.0 | D | 0.479 | neutral | None | None | None | None | N |
N/P | 0.9045 | likely_pathogenic | 0.8997 | pathogenic | 0.064 | Stabilizing | 0.998 | D | 0.467 | neutral | None | None | None | None | N |
N/Q | 0.3157 | likely_benign | 0.305 | benign | -0.306 | Destabilizing | 0.998 | D | 0.359 | neutral | None | None | None | None | N |
N/R | 0.3455 | ambiguous | 0.3275 | benign | 0.151 | Stabilizing | 0.998 | D | 0.351 | neutral | None | None | None | None | N |
N/S | 0.1366 | likely_benign | 0.1379 | benign | -0.077 | Destabilizing | 0.659 | D | 0.222 | neutral | N | 0.470617779 | None | None | N |
N/T | 0.2928 | likely_benign | 0.289 | benign | -0.025 | Destabilizing | 0.961 | D | 0.357 | neutral | N | 0.500999401 | None | None | N |
N/V | 0.5873 | likely_pathogenic | 0.5914 | pathogenic | 0.064 | Stabilizing | 0.998 | D | 0.495 | neutral | None | None | None | None | N |
N/W | 0.825 | likely_pathogenic | 0.8118 | pathogenic | -0.805 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
N/Y | 0.2418 | likely_benign | 0.2351 | benign | -0.473 | Destabilizing | 0.994 | D | 0.461 | neutral | N | 0.461883859 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.