Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5787 | 17584;17585;17586 | chr2:178731407;178731406;178731405 | chr2:179596134;179596133;179596132 |
N2AB | 5470 | 16633;16634;16635 | chr2:178731407;178731406;178731405 | chr2:179596134;179596133;179596132 |
N2A | 4543 | 13852;13853;13854 | chr2:178731407;178731406;178731405 | chr2:179596134;179596133;179596132 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs752558864 | -2.694 | 0.997 | D | 0.808 | 0.852 | 0.898220301615 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.34E-05 | 0 |
L/S | rs752558864 | -2.694 | 0.997 | D | 0.808 | 0.852 | 0.898220301615 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/S | rs752558864 | -2.694 | 0.997 | D | 0.808 | 0.852 | 0.898220301615 | gnomAD-4.0.0 | 2.41686E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.13616E-05 | 0 | 3.20256E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9206 | likely_pathogenic | 0.9236 | pathogenic | -2.142 | Highly Destabilizing | 0.983 | D | 0.747 | deleterious | None | None | None | None | N |
L/C | 0.8482 | likely_pathogenic | 0.852 | pathogenic | -1.361 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -2.944 | Highly Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
L/E | 0.9982 | likely_pathogenic | 0.9975 | pathogenic | -2.642 | Highly Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
L/F | 0.554 | ambiguous | 0.5975 | pathogenic | -1.363 | Destabilizing | 0.997 | D | 0.611 | neutral | D | 0.547209068 | None | None | N |
L/G | 0.9876 | likely_pathogenic | 0.9857 | pathogenic | -2.682 | Highly Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
L/H | 0.9911 | likely_pathogenic | 0.9896 | pathogenic | -2.66 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/I | 0.2238 | likely_benign | 0.2504 | benign | -0.505 | Destabilizing | 0.437 | N | 0.392 | neutral | None | None | None | None | N |
L/K | 0.9962 | likely_pathogenic | 0.9947 | pathogenic | -1.59 | Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
L/M | 0.3343 | likely_benign | 0.4016 | ambiguous | -0.792 | Destabilizing | 0.997 | D | 0.62 | neutral | D | 0.529611792 | None | None | N |
L/N | 0.9972 | likely_pathogenic | 0.9963 | pathogenic | -2.339 | Highly Destabilizing | 0.999 | D | 0.87 | deleterious | None | None | None | None | N |
L/P | 0.9982 | likely_pathogenic | 0.9969 | pathogenic | -1.045 | Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
L/Q | 0.9875 | likely_pathogenic | 0.9862 | pathogenic | -1.928 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
L/R | 0.9877 | likely_pathogenic | 0.9836 | pathogenic | -1.934 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
L/S | 0.9914 | likely_pathogenic | 0.9915 | pathogenic | -2.719 | Highly Destabilizing | 0.997 | D | 0.808 | deleterious | D | 0.549236984 | None | None | N |
L/T | 0.9746 | likely_pathogenic | 0.9763 | pathogenic | -2.258 | Highly Destabilizing | 0.983 | D | 0.763 | deleterious | None | None | None | None | N |
L/V | 0.2498 | likely_benign | 0.2936 | benign | -1.045 | Destabilizing | 0.37 | N | 0.427 | neutral | D | 0.547462557 | None | None | N |
L/W | 0.9682 | likely_pathogenic | 0.9701 | pathogenic | -1.706 | Destabilizing | 1.0 | D | 0.83 | deleterious | D | 0.549236984 | None | None | N |
L/Y | 0.9617 | likely_pathogenic | 0.9648 | pathogenic | -1.511 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.