Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5791 | 17596;17597;17598 | chr2:178731395;178731394;178731393 | chr2:179596122;179596121;179596120 |
N2AB | 5474 | 16645;16646;16647 | chr2:178731395;178731394;178731393 | chr2:179596122;179596121;179596120 |
N2A | 4547 | 13864;13865;13866 | chr2:178731395;178731394;178731393 | chr2:179596122;179596121;179596120 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs1276489578 | -0.684 | 0.01 | N | 0.105 | 0.127 | 0.110078149338 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
G/S | rs1276489578 | -0.684 | 0.01 | N | 0.105 | 0.127 | 0.110078149338 | gnomAD-4.0.0 | 1.36839E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79892E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0958 | likely_benign | 0.0947 | benign | -0.677 | Destabilizing | 0.002 | N | 0.109 | neutral | N | 0.409166675 | None | None | N |
G/C | 0.2283 | likely_benign | 0.201 | benign | -1.048 | Destabilizing | 0.98 | D | 0.465 | neutral | N | 0.491014481 | None | None | N |
G/D | 0.1262 | likely_benign | 0.115 | benign | -1.133 | Destabilizing | 0.002 | N | 0.148 | neutral | N | 0.382401362 | None | None | N |
G/E | 0.1504 | likely_benign | 0.1407 | benign | -1.265 | Destabilizing | 0.031 | N | 0.214 | neutral | None | None | None | None | N |
G/F | 0.4869 | ambiguous | 0.4541 | ambiguous | -1.354 | Destabilizing | 0.944 | D | 0.489 | neutral | None | None | None | None | N |
G/H | 0.2244 | likely_benign | 0.2064 | benign | -1.056 | Destabilizing | 0.981 | D | 0.453 | neutral | None | None | None | None | N |
G/I | 0.2833 | likely_benign | 0.278 | benign | -0.611 | Destabilizing | 0.893 | D | 0.483 | neutral | None | None | None | None | N |
G/K | 0.204 | likely_benign | 0.185 | benign | -1.12 | Destabilizing | 0.704 | D | 0.402 | neutral | None | None | None | None | N |
G/L | 0.346 | ambiguous | 0.3222 | benign | -0.611 | Destabilizing | 0.704 | D | 0.444 | neutral | None | None | None | None | N |
G/M | 0.3884 | ambiguous | 0.3691 | ambiguous | -0.43 | Destabilizing | 0.981 | D | 0.466 | neutral | None | None | None | None | N |
G/N | 0.1478 | likely_benign | 0.1344 | benign | -0.777 | Destabilizing | 0.704 | D | 0.328 | neutral | None | None | None | None | N |
G/P | 0.8227 | likely_pathogenic | 0.7732 | pathogenic | -0.597 | Destabilizing | 0.828 | D | 0.42 | neutral | None | None | None | None | N |
G/Q | 0.1829 | likely_benign | 0.1689 | benign | -1.089 | Destabilizing | 0.704 | D | 0.408 | neutral | None | None | None | None | N |
G/R | 0.1404 | likely_benign | 0.1318 | benign | -0.661 | Destabilizing | 0.642 | D | 0.444 | neutral | N | 0.410166753 | None | None | N |
G/S | 0.0791 | likely_benign | 0.0823 | benign | -0.963 | Destabilizing | 0.01 | N | 0.105 | neutral | N | 0.355985551 | None | None | N |
G/T | 0.1262 | likely_benign | 0.1249 | benign | -1.028 | Destabilizing | 0.031 | N | 0.226 | neutral | None | None | None | None | N |
G/V | 0.1892 | likely_benign | 0.1884 | benign | -0.597 | Destabilizing | 0.473 | N | 0.447 | neutral | N | 0.461211649 | None | None | N |
G/W | 0.3694 | ambiguous | 0.357 | ambiguous | -1.536 | Destabilizing | 0.995 | D | 0.462 | neutral | None | None | None | None | N |
G/Y | 0.344 | ambiguous | 0.3257 | benign | -1.178 | Destabilizing | 0.981 | D | 0.496 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.