Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5793 | 17602;17603;17604 | chr2:178731389;178731388;178731387 | chr2:179596116;179596115;179596114 |
N2AB | 5476 | 16651;16652;16653 | chr2:178731389;178731388;178731387 | chr2:179596116;179596115;179596114 |
N2A | 4549 | 13870;13871;13872 | chr2:178731389;178731388;178731387 | chr2:179596116;179596115;179596114 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1287275902 | -0.403 | 0.006 | N | 0.165 | 0.235 | 0.263140351381 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
E/K | rs1287275902 | -0.403 | 0.006 | N | 0.165 | 0.235 | 0.263140351381 | gnomAD-4.0.0 | 1.09472E-05 | None | None | None | None | N | None | 2.98829E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3492E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1847 | likely_benign | 0.1778 | benign | -0.651 | Destabilizing | 0.01 | N | 0.153 | neutral | N | 0.470029573 | None | None | N |
E/C | 0.9103 | likely_pathogenic | 0.8847 | pathogenic | -0.423 | Destabilizing | 0.995 | D | 0.459 | neutral | None | None | None | None | N |
E/D | 0.1442 | likely_benign | 0.1554 | benign | -0.908 | Destabilizing | 0.425 | N | 0.261 | neutral | N | 0.458620501 | None | None | N |
E/F | 0.8222 | likely_pathogenic | 0.8048 | pathogenic | -0.084 | Destabilizing | 0.981 | D | 0.483 | neutral | None | None | None | None | N |
E/G | 0.2022 | likely_benign | 0.2053 | benign | -0.981 | Destabilizing | 0.425 | N | 0.414 | neutral | N | 0.492175714 | None | None | N |
E/H | 0.4922 | ambiguous | 0.4908 | ambiguous | -0.174 | Destabilizing | 0.944 | D | 0.385 | neutral | None | None | None | None | N |
E/I | 0.5464 | ambiguous | 0.5136 | ambiguous | 0.238 | Stabilizing | 0.893 | D | 0.476 | neutral | None | None | None | None | N |
E/K | 0.1829 | likely_benign | 0.1851 | benign | -0.437 | Destabilizing | 0.006 | N | 0.165 | neutral | N | 0.474203242 | None | None | N |
E/L | 0.4647 | ambiguous | 0.4524 | ambiguous | 0.238 | Stabilizing | 0.704 | D | 0.435 | neutral | None | None | None | None | N |
E/M | 0.5152 | ambiguous | 0.4997 | ambiguous | 0.461 | Stabilizing | 0.981 | D | 0.447 | neutral | None | None | None | None | N |
E/N | 0.2579 | likely_benign | 0.2707 | benign | -0.89 | Destabilizing | 0.704 | D | 0.217 | neutral | None | None | None | None | N |
E/P | 0.9037 | likely_pathogenic | 0.8991 | pathogenic | -0.037 | Destabilizing | 0.828 | D | 0.405 | neutral | None | None | None | None | N |
E/Q | 0.1483 | likely_benign | 0.1519 | benign | -0.764 | Destabilizing | 0.065 | N | 0.116 | neutral | N | 0.438455872 | None | None | N |
E/R | 0.3034 | likely_benign | 0.2963 | benign | -0.077 | Destabilizing | 0.543 | D | 0.221 | neutral | None | None | None | None | N |
E/S | 0.2062 | likely_benign | 0.2071 | benign | -1.138 | Destabilizing | 0.085 | N | 0.137 | neutral | None | None | None | None | N |
E/T | 0.2379 | likely_benign | 0.225 | benign | -0.868 | Destabilizing | 0.031 | N | 0.181 | neutral | None | None | None | None | N |
E/V | 0.3057 | likely_benign | 0.2852 | benign | -0.037 | Destabilizing | 0.642 | D | 0.425 | neutral | N | 0.49252243 | None | None | N |
E/W | 0.9319 | likely_pathogenic | 0.9259 | pathogenic | 0.16 | Stabilizing | 0.995 | D | 0.502 | neutral | None | None | None | None | N |
E/Y | 0.7244 | likely_pathogenic | 0.7194 | pathogenic | 0.159 | Stabilizing | 0.981 | D | 0.471 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.