Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5794 | 17605;17606;17607 | chr2:178731386;178731385;178731384 | chr2:179596113;179596112;179596111 |
N2AB | 5477 | 16654;16655;16656 | chr2:178731386;178731385;178731384 | chr2:179596113;179596112;179596111 |
N2A | 4550 | 13873;13874;13875 | chr2:178731386;178731385;178731384 | chr2:179596113;179596112;179596111 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs879167621 | None | 0.001 | N | 0.125 | 0.084 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs879167621 | None | 0.001 | N | 0.125 | 0.084 | None | gnomAD-4.0.0 | 1.31458E-05 | None | None | None | None | N | None | 4.82719E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1181 | likely_benign | 0.1128 | benign | -0.993 | Destabilizing | 0.047 | N | 0.155 | neutral | N | 0.383326868 | None | None | N |
V/C | 0.6993 | likely_pathogenic | 0.679 | pathogenic | -0.484 | Destabilizing | 0.94 | D | 0.265 | neutral | None | None | None | None | N |
V/D | 0.1661 | likely_benign | 0.1542 | benign | -1.123 | Destabilizing | 0.351 | N | 0.404 | neutral | N | 0.444338042 | None | None | N |
V/E | 0.1509 | likely_benign | 0.1407 | benign | -1.199 | Destabilizing | 0.228 | N | 0.247 | neutral | None | None | None | None | N |
V/F | 0.1413 | likely_benign | 0.1362 | benign | -1.023 | Destabilizing | 0.351 | N | 0.379 | neutral | N | 0.435006482 | None | None | N |
V/G | 0.1147 | likely_benign | 0.1082 | benign | -1.199 | Destabilizing | 0.101 | N | 0.266 | neutral | N | 0.4445114 | None | None | N |
V/H | 0.4175 | ambiguous | 0.4087 | ambiguous | -0.86 | Destabilizing | 0.94 | D | 0.345 | neutral | None | None | None | None | N |
V/I | 0.0769 | likely_benign | 0.0748 | benign | -0.557 | Destabilizing | 0.001 | N | 0.125 | neutral | N | 0.438969507 | None | None | N |
V/K | 0.1889 | likely_benign | 0.1859 | benign | -0.96 | Destabilizing | 0.004 | N | 0.156 | neutral | None | None | None | None | N |
V/L | 0.1291 | likely_benign | 0.1284 | benign | -0.557 | Destabilizing | None | N | 0.063 | neutral | N | 0.390463484 | None | None | N |
V/M | 0.1061 | likely_benign | 0.1014 | benign | -0.394 | Destabilizing | 0.716 | D | 0.209 | neutral | None | None | None | None | N |
V/N | 0.1591 | likely_benign | 0.1497 | benign | -0.535 | Destabilizing | 0.418 | N | 0.401 | neutral | None | None | None | None | N |
V/P | 0.2252 | likely_benign | 0.214 | benign | -0.669 | Destabilizing | 0.002 | N | 0.172 | neutral | None | None | None | None | N |
V/Q | 0.2035 | likely_benign | 0.2016 | benign | -0.79 | Destabilizing | 0.418 | N | 0.421 | neutral | None | None | None | None | N |
V/R | 0.1916 | likely_benign | 0.1969 | benign | -0.38 | Destabilizing | 0.002 | N | 0.221 | neutral | None | None | None | None | N |
V/S | 0.1358 | likely_benign | 0.1305 | benign | -0.839 | Destabilizing | 0.004 | N | 0.15 | neutral | None | None | None | None | N |
V/T | 0.1429 | likely_benign | 0.1361 | benign | -0.827 | Destabilizing | 0.004 | N | 0.099 | neutral | None | None | None | None | N |
V/W | 0.6302 | likely_pathogenic | 0.6196 | pathogenic | -1.163 | Destabilizing | 0.983 | D | 0.349 | neutral | None | None | None | None | N |
V/Y | 0.4007 | ambiguous | 0.3842 | ambiguous | -0.897 | Destabilizing | 0.836 | D | 0.349 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.