Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5795 | 17608;17609;17610 | chr2:178731383;178731382;178731381 | chr2:179596110;179596109;179596108 |
N2AB | 5478 | 16657;16658;16659 | chr2:178731383;178731382;178731381 | chr2:179596110;179596109;179596108 |
N2A | 4551 | 13876;13877;13878 | chr2:178731383;178731382;178731381 | chr2:179596110;179596109;179596108 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1226206785 | 0.228 | 0.334 | N | 0.289 | 0.14 | 0.126345400529 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
K/E | rs1226206785 | 0.228 | 0.334 | N | 0.289 | 0.14 | 0.126345400529 | gnomAD-4.0.0 | 3.18243E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71654E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2511 | likely_benign | 0.2261 | benign | -0.039 | Destabilizing | 0.25 | N | 0.332 | neutral | None | None | None | None | N |
K/C | 0.6164 | likely_pathogenic | 0.5763 | pathogenic | -0.098 | Destabilizing | 0.992 | D | 0.279 | neutral | None | None | None | None | N |
K/D | 0.3952 | ambiguous | 0.3743 | ambiguous | -0.105 | Destabilizing | 0.447 | N | 0.331 | neutral | None | None | None | None | N |
K/E | 0.1368 | likely_benign | 0.1353 | benign | -0.073 | Destabilizing | 0.334 | N | 0.289 | neutral | N | 0.384342802 | None | None | N |
K/F | 0.6424 | likely_pathogenic | 0.6031 | pathogenic | -0.083 | Destabilizing | 0.972 | D | 0.281 | neutral | None | None | None | None | N |
K/G | 0.3028 | likely_benign | 0.2772 | benign | -0.282 | Destabilizing | 0.25 | N | 0.305 | neutral | None | None | None | None | N |
K/H | 0.2538 | likely_benign | 0.2479 | benign | -0.543 | Destabilizing | 0.92 | D | 0.311 | neutral | None | None | None | None | N |
K/I | 0.2642 | likely_benign | 0.2461 | benign | 0.537 | Stabilizing | 0.92 | D | 0.307 | neutral | None | None | None | None | N |
K/L | 0.2842 | likely_benign | 0.2631 | benign | 0.537 | Stabilizing | 0.617 | D | 0.319 | neutral | None | None | None | None | N |
K/M | 0.194 | likely_benign | 0.183 | benign | 0.227 | Stabilizing | 0.963 | D | 0.314 | neutral | N | 0.476834462 | None | None | N |
K/N | 0.2671 | likely_benign | 0.2472 | benign | 0.159 | Stabilizing | 0.002 | N | 0.111 | neutral | N | 0.392311711 | None | None | N |
K/P | 0.5013 | ambiguous | 0.4622 | ambiguous | 0.374 | Stabilizing | 0.92 | D | 0.326 | neutral | None | None | None | None | N |
K/Q | 0.1139 | likely_benign | 0.1132 | benign | 0.04 | Stabilizing | 0.549 | D | 0.325 | neutral | N | 0.430003307 | None | None | N |
K/R | 0.0832 | likely_benign | 0.0819 | benign | -0.14 | Destabilizing | 0.004 | N | 0.175 | neutral | N | 0.425424207 | None | None | N |
K/S | 0.2636 | likely_benign | 0.246 | benign | -0.266 | Destabilizing | 0.026 | N | 0.117 | neutral | None | None | None | None | N |
K/T | 0.1392 | likely_benign | 0.1289 | benign | -0.08 | Destabilizing | 0.379 | N | 0.314 | neutral | N | 0.427405719 | None | None | N |
K/V | 0.2868 | likely_benign | 0.2612 | benign | 0.374 | Stabilizing | 0.617 | D | 0.311 | neutral | None | None | None | None | N |
K/W | 0.6447 | likely_pathogenic | 0.6173 | pathogenic | -0.116 | Destabilizing | 0.992 | D | 0.421 | neutral | None | None | None | None | N |
K/Y | 0.5272 | ambiguous | 0.505 | ambiguous | 0.204 | Stabilizing | 0.972 | D | 0.296 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.