Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5800 | 17623;17624;17625 | chr2:178731368;178731367;178731366 | chr2:179596095;179596094;179596093 |
N2AB | 5483 | 16672;16673;16674 | chr2:178731368;178731367;178731366 | chr2:179596095;179596094;179596093 |
N2A | 4556 | 13891;13892;13893 | chr2:178731368;178731367;178731366 | chr2:179596095;179596094;179596093 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1470486137 | -0.962 | 1.0 | D | 0.877 | 0.894 | 0.789156113237 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Y/H | None | None | 1.0 | D | 0.781 | 0.868 | 0.654469489857 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Y/N | None | None | 1.0 | D | 0.885 | 0.881 | 0.846485612073 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9957 | likely_pathogenic | 0.9953 | pathogenic | -2.422 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/C | 0.9743 | likely_pathogenic | 0.9747 | pathogenic | -1.346 | Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.618134369 | None | None | N |
Y/D | 0.9985 | likely_pathogenic | 0.9982 | pathogenic | -3.207 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.618134369 | None | None | N |
Y/E | 0.9991 | likely_pathogenic | 0.9988 | pathogenic | -2.958 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Y/F | 0.1904 | likely_benign | 0.1991 | benign | -0.911 | Destabilizing | 0.999 | D | 0.672 | neutral | D | 0.5838758 | None | None | N |
Y/G | 0.9938 | likely_pathogenic | 0.993 | pathogenic | -2.869 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Y/H | 0.9886 | likely_pathogenic | 0.9872 | pathogenic | -2.274 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.617932564 | None | None | N |
Y/I | 0.8776 | likely_pathogenic | 0.8632 | pathogenic | -0.931 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/K | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -1.958 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/L | 0.8557 | likely_pathogenic | 0.8547 | pathogenic | -0.931 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | N |
Y/M | 0.9673 | likely_pathogenic | 0.9694 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Y/N | 0.9906 | likely_pathogenic | 0.9895 | pathogenic | -2.931 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.618134369 | None | None | N |
Y/P | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -1.445 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
Y/Q | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -2.471 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/R | 0.9974 | likely_pathogenic | 0.9966 | pathogenic | -2.248 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Y/S | 0.9952 | likely_pathogenic | 0.9948 | pathogenic | -3.147 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | D | 0.618134369 | None | None | N |
Y/T | 0.9958 | likely_pathogenic | 0.9954 | pathogenic | -2.751 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/V | 0.8533 | likely_pathogenic | 0.8512 | pathogenic | -1.445 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Y/W | 0.8949 | likely_pathogenic | 0.8671 | pathogenic | -0.302 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.