Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5804 | 17635;17636;17637 | chr2:178731356;178731355;178731354 | chr2:179596083;179596082;179596081 |
N2AB | 5487 | 16684;16685;16686 | chr2:178731356;178731355;178731354 | chr2:179596083;179596082;179596081 |
N2A | 4560 | 13903;13904;13905 | chr2:178731356;178731355;178731354 | chr2:179596083;179596082;179596081 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs773397477 | -2.109 | 0.999 | D | 0.577 | 0.581 | 0.600586691565 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
A/S | rs773397477 | -2.109 | 0.999 | D | 0.577 | 0.581 | 0.600586691565 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85837E-06 | 0 | 0 |
A/T | None | None | 0.999 | D | 0.701 | 0.63 | 0.635264866943 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85837E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8498 | likely_pathogenic | 0.8421 | pathogenic | -1.498 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
A/D | 0.9966 | likely_pathogenic | 0.9966 | pathogenic | -2.679 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.606729735 | None | None | N |
A/E | 0.9883 | likely_pathogenic | 0.9891 | pathogenic | -2.456 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
A/F | 0.9121 | likely_pathogenic | 0.9141 | pathogenic | -0.819 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
A/G | 0.4343 | ambiguous | 0.4406 | ambiguous | -1.95 | Destabilizing | 0.999 | D | 0.571 | neutral | D | 0.606326127 | None | None | N |
A/H | 0.9965 | likely_pathogenic | 0.9966 | pathogenic | -2.173 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
A/I | 0.4924 | ambiguous | 0.5061 | ambiguous | -0.147 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
A/K | 0.9978 | likely_pathogenic | 0.9978 | pathogenic | -1.382 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/L | 0.5439 | ambiguous | 0.572 | pathogenic | -0.147 | Destabilizing | 0.504 | D | 0.481 | neutral | None | None | None | None | N |
A/M | 0.7438 | likely_pathogenic | 0.7716 | pathogenic | -0.545 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
A/N | 0.9889 | likely_pathogenic | 0.9896 | pathogenic | -1.767 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
A/P | 0.9914 | likely_pathogenic | 0.9904 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.606527931 | None | None | N |
A/Q | 0.9852 | likely_pathogenic | 0.9862 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
A/R | 0.9925 | likely_pathogenic | 0.9923 | pathogenic | -1.47 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
A/S | 0.5273 | ambiguous | 0.5417 | ambiguous | -2.185 | Highly Destabilizing | 0.999 | D | 0.577 | neutral | D | 0.606124322 | None | None | N |
A/T | 0.5936 | likely_pathogenic | 0.6204 | pathogenic | -1.838 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | D | 0.605922518 | None | None | N |
A/V | 0.2567 | likely_benign | 0.2688 | benign | -0.547 | Destabilizing | 0.992 | D | 0.539 | neutral | D | 0.536529498 | None | None | N |
A/W | 0.9957 | likely_pathogenic | 0.9958 | pathogenic | -1.542 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
A/Y | 0.9824 | likely_pathogenic | 0.9812 | pathogenic | -1.065 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.