Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5806 | 17641;17642;17643 | chr2:178731350;178731349;178731348 | chr2:179596077;179596076;179596075 |
N2AB | 5489 | 16690;16691;16692 | chr2:178731350;178731349;178731348 | chr2:179596077;179596076;179596075 |
N2A | 4562 | 13909;13910;13911 | chr2:178731350;178731349;178731348 | chr2:179596077;179596076;179596075 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs990308126 | None | 1.0 | D | 0.742 | 0.497 | 0.247872288689 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
N/K | rs990308126 | None | 1.0 | D | 0.742 | 0.497 | 0.247872288689 | gnomAD-4.0.0 | 7.68732E-06 | None | None | None | None | I | None | 0 | 1.69509E-05 | None | 0 | 0 | None | 0 | 0 | 7.1794E-06 | 0 | 5.68861E-05 |
N/S | None | None | 0.999 | N | 0.594 | 0.524 | 0.325263233342 | gnomAD-4.0.0 | 4.1054E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39692E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9976 | likely_pathogenic | 0.9962 | pathogenic | -0.668 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
N/C | 0.9915 | likely_pathogenic | 0.9862 | pathogenic | -0.118 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
N/D | 0.9798 | likely_pathogenic | 0.9732 | pathogenic | -1.442 | Destabilizing | 0.999 | D | 0.63 | neutral | D | 0.525431741 | None | None | I |
N/E | 0.9984 | likely_pathogenic | 0.9979 | pathogenic | -1.357 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | I |
N/F | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -0.616 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
N/G | 0.9868 | likely_pathogenic | 0.9794 | pathogenic | -0.973 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | I |
N/H | 0.9906 | likely_pathogenic | 0.9874 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.741 | deleterious | D | 0.526699189 | None | None | I |
N/I | 0.9952 | likely_pathogenic | 0.9946 | pathogenic | 0.097 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | D | 0.526952678 | None | None | I |
N/K | 0.9987 | likely_pathogenic | 0.9985 | pathogenic | -0.262 | Destabilizing | 1.0 | D | 0.742 | deleterious | D | 0.52619221 | None | None | I |
N/L | 0.992 | likely_pathogenic | 0.9911 | pathogenic | 0.097 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
N/M | 0.9939 | likely_pathogenic | 0.9929 | pathogenic | 0.615 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
N/P | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
N/Q | 0.999 | likely_pathogenic | 0.9987 | pathogenic | -1.096 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
N/R | 0.9984 | likely_pathogenic | 0.9983 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
N/S | 0.9144 | likely_pathogenic | 0.8794 | pathogenic | -0.862 | Destabilizing | 0.999 | D | 0.594 | neutral | N | 0.494957223 | None | None | I |
N/T | 0.9687 | likely_pathogenic | 0.9585 | pathogenic | -0.614 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | N | 0.514328925 | None | None | I |
N/V | 0.9949 | likely_pathogenic | 0.9942 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
N/W | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -0.461 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
N/Y | 0.9926 | likely_pathogenic | 0.992 | pathogenic | -0.162 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.526699189 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.