Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5808 | 17647;17648;17649 | chr2:178731344;178731343;178731342 | chr2:179596071;179596070;179596069 |
N2AB | 5491 | 16696;16697;16698 | chr2:178731344;178731343;178731342 | chr2:179596071;179596070;179596069 |
N2A | 4564 | 13915;13916;13917 | chr2:178731344;178731343;178731342 | chr2:179596071;179596070;179596069 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 1.0 | N | 0.63 | 0.355 | 0.378498632473 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85838E-06 | 0 | 0 |
A/V | rs1409068952 | None | 1.0 | D | 0.669 | 0.371 | 0.449088463789 | gnomAD-4.0.0 | 1.36843E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79896E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7837 | likely_pathogenic | 0.7757 | pathogenic | -0.879 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
A/D | 0.9344 | likely_pathogenic | 0.9316 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
A/E | 0.9119 | likely_pathogenic | 0.9061 | pathogenic | -0.823 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | N | 0.492546546 | None | None | I |
A/F | 0.6655 | likely_pathogenic | 0.7155 | pathogenic | -0.981 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
A/G | 0.3394 | likely_benign | 0.3531 | ambiguous | -0.279 | Destabilizing | 1.0 | D | 0.593 | neutral | N | 0.487493663 | None | None | I |
A/H | 0.9272 | likely_pathogenic | 0.9345 | pathogenic | -0.233 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
A/I | 0.6369 | likely_pathogenic | 0.6422 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
A/K | 0.977 | likely_pathogenic | 0.9784 | pathogenic | -0.601 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
A/L | 0.6296 | likely_pathogenic | 0.636 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
A/M | 0.6618 | likely_pathogenic | 0.6777 | pathogenic | -0.603 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
A/N | 0.8667 | likely_pathogenic | 0.8751 | pathogenic | -0.316 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
A/P | 0.9771 | likely_pathogenic | 0.9776 | pathogenic | -0.392 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | D | 0.527540515 | None | None | I |
A/Q | 0.9093 | likely_pathogenic | 0.916 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
A/R | 0.9281 | likely_pathogenic | 0.9355 | pathogenic | -0.13 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
A/S | 0.231 | likely_benign | 0.2314 | benign | -0.484 | Destabilizing | 1.0 | D | 0.63 | neutral | N | 0.515551219 | None | None | I |
A/T | 0.3846 | ambiguous | 0.369 | ambiguous | -0.569 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | D | 0.524245151 | None | None | I |
A/V | 0.3387 | likely_benign | 0.3253 | benign | -0.392 | Destabilizing | 1.0 | D | 0.669 | neutral | D | 0.524938706 | None | None | I |
A/W | 0.9625 | likely_pathogenic | 0.9694 | pathogenic | -1.064 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
A/Y | 0.8708 | likely_pathogenic | 0.889 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.