Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5810 | 17653;17654;17655 | chr2:178731338;178731337;178731336 | chr2:179596065;179596064;179596063 |
N2AB | 5493 | 16702;16703;16704 | chr2:178731338;178731337;178731336 | chr2:179596065;179596064;179596063 |
N2A | 4566 | 13921;13922;13923 | chr2:178731338;178731337;178731336 | chr2:179596065;179596064;179596063 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs762158553 | -0.411 | 0.655 | N | 0.433 | 0.184 | 0.615969100344 | gnomAD-4.0.0 | 7.95641E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85838E-06 | 5.73148E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.392 | ambiguous | 0.4191 | ambiguous | -1.254 | Destabilizing | 0.004 | N | 0.189 | neutral | None | None | None | None | I |
I/C | 0.6766 | likely_pathogenic | 0.6868 | pathogenic | -0.725 | Destabilizing | 0.836 | D | 0.498 | neutral | None | None | None | None | I |
I/D | 0.6514 | likely_pathogenic | 0.6449 | pathogenic | -0.781 | Destabilizing | 0.418 | N | 0.561 | neutral | None | None | None | None | I |
I/E | 0.5009 | ambiguous | 0.4759 | ambiguous | -0.849 | Destabilizing | 0.264 | N | 0.583 | neutral | None | None | None | None | I |
I/F | 0.1294 | likely_benign | 0.1353 | benign | -1.023 | Destabilizing | 0.716 | D | 0.389 | neutral | None | None | None | None | I |
I/G | 0.6047 | likely_pathogenic | 0.636 | pathogenic | -1.484 | Destabilizing | 0.228 | N | 0.587 | neutral | None | None | None | None | I |
I/H | 0.4822 | ambiguous | 0.4761 | ambiguous | -0.656 | Destabilizing | 0.836 | D | 0.549 | neutral | None | None | None | None | I |
I/K | 0.4118 | ambiguous | 0.3892 | ambiguous | -0.81 | Destabilizing | 0.213 | N | 0.589 | neutral | N | 0.409012826 | None | None | I |
I/L | 0.1123 | likely_benign | 0.1202 | benign | -0.737 | Destabilizing | 0.047 | N | 0.185 | neutral | N | 0.46138866 | None | None | I |
I/M | 0.0943 | likely_benign | 0.0945 | benign | -0.569 | Destabilizing | 0.655 | D | 0.433 | neutral | N | 0.443149616 | None | None | I |
I/N | 0.247 | likely_benign | 0.2381 | benign | -0.541 | Destabilizing | 0.418 | N | 0.574 | neutral | None | None | None | None | I |
I/P | 0.8291 | likely_pathogenic | 0.8624 | pathogenic | -0.877 | Destabilizing | 0.836 | D | 0.559 | neutral | None | None | None | None | I |
I/Q | 0.4138 | ambiguous | 0.4019 | ambiguous | -0.813 | Destabilizing | 0.027 | N | 0.417 | neutral | None | None | None | None | I |
I/R | 0.3541 | ambiguous | 0.3435 | ambiguous | -0.126 | Destabilizing | 0.351 | N | 0.567 | neutral | N | 0.466447763 | None | None | I |
I/S | 0.2438 | likely_benign | 0.2424 | benign | -1.036 | Destabilizing | 0.012 | N | 0.266 | neutral | None | None | None | None | I |
I/T | 0.2364 | likely_benign | 0.2408 | benign | -1.0 | Destabilizing | 0.101 | N | 0.468 | neutral | N | 0.412941352 | None | None | I |
I/V | 0.0941 | likely_benign | 0.1002 | benign | -0.877 | Destabilizing | 0.001 | N | 0.122 | neutral | N | 0.418925962 | None | None | I |
I/W | 0.6424 | likely_pathogenic | 0.6578 | pathogenic | -1.011 | Destabilizing | 0.983 | D | 0.56 | neutral | None | None | None | None | I |
I/Y | 0.3788 | ambiguous | 0.3708 | ambiguous | -0.81 | Destabilizing | 0.836 | D | 0.504 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.