Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5814 | 17665;17666;17667 | chr2:178731326;178731325;178731324 | chr2:179596053;179596052;179596051 |
N2AB | 5497 | 16714;16715;16716 | chr2:178731326;178731325;178731324 | chr2:179596053;179596052;179596051 |
N2A | 4570 | 13933;13934;13935 | chr2:178731326;178731325;178731324 | chr2:179596053;179596052;179596051 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1318339227 | -0.57 | None | N | 0.463 | 0.211 | 0.482500522706 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/F | rs1318339227 | -0.57 | None | N | 0.463 | 0.211 | 0.482500522706 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 0 | 2.28645E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/P | None | None | 0.741 | N | 0.566 | 0.525 | 0.419335720491 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0959 | likely_benign | 0.0979 | benign | -0.513 | Destabilizing | 0.052 | N | 0.525 | neutral | N | 0.503925623 | None | None | N |
S/C | 0.1765 | likely_benign | 0.1715 | benign | -0.398 | Destabilizing | 0.915 | D | 0.546 | neutral | N | 0.517816824 | None | None | N |
S/D | 0.6619 | likely_pathogenic | 0.5478 | ambiguous | -0.104 | Destabilizing | 0.081 | N | 0.509 | neutral | None | None | None | None | N |
S/E | 0.7183 | likely_pathogenic | 0.5966 | pathogenic | -0.143 | Destabilizing | 0.002 | N | 0.413 | neutral | None | None | None | None | N |
S/F | 0.1459 | likely_benign | 0.1348 | benign | -0.753 | Destabilizing | None | N | 0.463 | neutral | N | 0.519631674 | None | None | N |
S/G | 0.1582 | likely_benign | 0.1559 | benign | -0.727 | Destabilizing | 0.262 | N | 0.525 | neutral | None | None | None | None | N |
S/H | 0.4288 | ambiguous | 0.3641 | ambiguous | -1.228 | Destabilizing | 0.555 | D | 0.553 | neutral | None | None | None | None | N |
S/I | 0.2108 | likely_benign | 0.1986 | benign | -0.063 | Destabilizing | 0.235 | N | 0.639 | neutral | None | None | None | None | N |
S/K | 0.8643 | likely_pathogenic | 0.7776 | pathogenic | -0.759 | Destabilizing | 0.149 | N | 0.509 | neutral | None | None | None | None | N |
S/L | 0.122 | likely_benign | 0.1161 | benign | -0.063 | Destabilizing | 0.081 | N | 0.594 | neutral | None | None | None | None | N |
S/M | 0.2218 | likely_benign | 0.2142 | benign | 0.144 | Stabilizing | 0.555 | D | 0.553 | neutral | None | None | None | None | N |
S/N | 0.2119 | likely_benign | 0.1859 | benign | -0.574 | Destabilizing | 0.262 | N | 0.549 | neutral | None | None | None | None | N |
S/P | 0.619 | likely_pathogenic | 0.5705 | pathogenic | -0.179 | Destabilizing | 0.741 | D | 0.566 | neutral | N | 0.499370174 | None | None | N |
S/Q | 0.6231 | likely_pathogenic | 0.5604 | ambiguous | -0.755 | Destabilizing | 0.38 | N | 0.504 | neutral | None | None | None | None | N |
S/R | 0.7983 | likely_pathogenic | 0.6945 | pathogenic | -0.598 | Destabilizing | 0.38 | N | 0.565 | neutral | None | None | None | None | N |
S/T | 0.094 | likely_benign | 0.0883 | benign | -0.614 | Destabilizing | 0.002 | N | 0.426 | neutral | N | 0.479590419 | None | None | N |
S/V | 0.1895 | likely_benign | 0.1803 | benign | -0.179 | Destabilizing | 0.081 | N | 0.599 | neutral | None | None | None | None | N |
S/W | 0.3588 | ambiguous | 0.3235 | benign | -0.749 | Destabilizing | 0.824 | D | 0.671 | neutral | None | None | None | None | N |
S/Y | 0.174 | likely_benign | 0.1576 | benign | -0.495 | Destabilizing | 0.188 | N | 0.639 | neutral | D | 0.528347158 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.