Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5815 | 17668;17669;17670 | chr2:178731323;178731322;178731321 | chr2:179596050;179596049;179596048 |
N2AB | 5498 | 16717;16718;16719 | chr2:178731323;178731322;178731321 | chr2:179596050;179596049;179596048 |
N2A | 4571 | 13936;13937;13938 | chr2:178731323;178731322;178731321 | chr2:179596050;179596049;179596048 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 1.0 | N | 0.591 | 0.525 | 0.530606565545 | gnomAD-4.0.0 | 6.84241E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87371E-05 | 0 | 0 | 0 | 0 |
A/T | rs987166734 | None | 1.0 | N | 0.711 | 0.536 | 0.511790803624 | gnomAD-4.0.0 | 1.59146E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85866E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.799 | likely_pathogenic | 0.8251 | pathogenic | -0.84 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
A/D | 0.9701 | likely_pathogenic | 0.9666 | pathogenic | -0.84 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
A/E | 0.9777 | likely_pathogenic | 0.9735 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.85 | deleterious | D | 0.538317843 | None | None | N |
A/F | 0.9393 | likely_pathogenic | 0.9457 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
A/G | 0.1973 | likely_benign | 0.2111 | benign | -1.144 | Destabilizing | 1.0 | D | 0.591 | neutral | N | 0.506223937 | None | None | N |
A/H | 0.981 | likely_pathogenic | 0.9827 | pathogenic | -1.368 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
A/I | 0.9117 | likely_pathogenic | 0.9174 | pathogenic | 0.189 | Stabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
A/K | 0.9933 | likely_pathogenic | 0.9916 | pathogenic | -0.819 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
A/L | 0.8275 | likely_pathogenic | 0.8336 | pathogenic | 0.189 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/M | 0.8491 | likely_pathogenic | 0.8652 | pathogenic | 0.006 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/N | 0.9406 | likely_pathogenic | 0.9471 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
A/P | 0.9918 | likely_pathogenic | 0.9903 | pathogenic | -0.082 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.538571333 | None | None | N |
A/Q | 0.964 | likely_pathogenic | 0.9614 | pathogenic | -0.743 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
A/R | 0.9822 | likely_pathogenic | 0.9764 | pathogenic | -0.804 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
A/S | 0.1745 | likely_benign | 0.2003 | benign | -1.322 | Destabilizing | 1.0 | D | 0.613 | neutral | N | 0.497550203 | None | None | N |
A/T | 0.4041 | ambiguous | 0.4428 | ambiguous | -1.101 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.51029886 | None | None | N |
A/V | 0.6653 | likely_pathogenic | 0.6756 | pathogenic | -0.082 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.488392263 | None | None | N |
A/W | 0.9953 | likely_pathogenic | 0.9958 | pathogenic | -1.154 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
A/Y | 0.977 | likely_pathogenic | 0.979 | pathogenic | -0.617 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.