Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5817 | 17674;17675;17676 | chr2:178731317;178731316;178731315 | chr2:179596044;179596043;179596042 |
N2AB | 5500 | 16723;16724;16725 | chr2:178731317;178731316;178731315 | chr2:179596044;179596043;179596042 |
N2A | 4573 | 13942;13943;13944 | chr2:178731317;178731316;178731315 | chr2:179596044;179596043;179596042 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.999 | N | 0.839 | 0.456 | 0.578326236229 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/I | None | None | 0.992 | N | 0.623 | 0.363 | 0.467839254973 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9554 | likely_pathogenic | 0.9663 | pathogenic | -2.729 | Highly Destabilizing | 0.997 | D | 0.732 | prob.delet. | None | None | None | None | N |
L/C | 0.9267 | likely_pathogenic | 0.9462 | pathogenic | -2.5 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
L/D | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -2.372 | Highly Destabilizing | 1.0 | D | 0.931 | deleterious | None | None | None | None | N |
L/E | 0.9954 | likely_pathogenic | 0.9957 | pathogenic | -2.099 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/F | 0.5983 | likely_pathogenic | 0.6556 | pathogenic | -1.745 | Destabilizing | 0.999 | D | 0.839 | deleterious | N | 0.509603027 | None | None | N |
L/G | 0.9921 | likely_pathogenic | 0.9935 | pathogenic | -3.312 | Highly Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
L/H | 0.9787 | likely_pathogenic | 0.9833 | pathogenic | -2.708 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | D | 0.528810146 | None | None | N |
L/I | 0.2536 | likely_benign | 0.2795 | benign | -1.014 | Destabilizing | 0.992 | D | 0.623 | neutral | N | 0.501534724 | None | None | N |
L/K | 0.9925 | likely_pathogenic | 0.993 | pathogenic | -1.933 | Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
L/M | 0.4635 | ambiguous | 0.5031 | ambiguous | -1.302 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/N | 0.9948 | likely_pathogenic | 0.9958 | pathogenic | -2.353 | Highly Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | N |
L/P | 0.9953 | likely_pathogenic | 0.9955 | pathogenic | -1.571 | Destabilizing | 1.0 | D | 0.923 | deleterious | D | 0.528810146 | None | None | N |
L/Q | 0.9759 | likely_pathogenic | 0.9779 | pathogenic | -2.111 | Highly Destabilizing | 1.0 | D | 0.933 | deleterious | None | None | None | None | N |
L/R | 0.9786 | likely_pathogenic | 0.9801 | pathogenic | -1.84 | Destabilizing | 1.0 | D | 0.935 | deleterious | D | 0.528810146 | None | None | N |
L/S | 0.992 | likely_pathogenic | 0.9938 | pathogenic | -3.227 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
L/T | 0.9743 | likely_pathogenic | 0.9803 | pathogenic | -2.78 | Highly Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
L/V | 0.2971 | likely_benign | 0.3453 | ambiguous | -1.571 | Destabilizing | 0.767 | D | 0.355 | neutral | N | 0.515924073 | None | None | N |
L/W | 0.9485 | likely_pathogenic | 0.9601 | pathogenic | -1.924 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/Y | 0.9528 | likely_pathogenic | 0.9643 | pathogenic | -1.723 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.