Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5818 | 17677;17678;17679 | chr2:178731314;178731313;178731312 | chr2:179596041;179596040;179596039 |
N2AB | 5501 | 16726;16727;16728 | chr2:178731314;178731313;178731312 | chr2:179596041;179596040;179596039 |
N2A | 4574 | 13945;13946;13947 | chr2:178731314;178731313;178731312 | chr2:179596041;179596040;179596039 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs749007462 | -0.423 | 0.669 | N | 0.461 | 0.288 | 0.478828542108 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 0 |
S/L | rs749007462 | -0.423 | 0.669 | N | 0.461 | 0.288 | 0.478828542108 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07641E-04 | 0 |
S/L | rs749007462 | -0.423 | 0.669 | N | 0.461 | 0.288 | 0.478828542108 | gnomAD-4.0.0 | 6.19769E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.09823E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0739 | likely_benign | 0.0741 | benign | -0.762 | Destabilizing | 0.005 | N | 0.107 | neutral | N | 0.439743951 | None | None | N |
S/C | 0.1366 | likely_benign | 0.1552 | benign | -0.429 | Destabilizing | 0.998 | D | 0.411 | neutral | None | None | None | None | N |
S/D | 0.44 | ambiguous | 0.3799 | ambiguous | 0.186 | Stabilizing | 0.842 | D | 0.369 | neutral | None | None | None | None | N |
S/E | 0.4935 | ambiguous | 0.4282 | ambiguous | 0.122 | Stabilizing | 0.842 | D | 0.369 | neutral | None | None | None | None | N |
S/F | 0.1534 | likely_benign | 0.144 | benign | -1.219 | Destabilizing | 0.974 | D | 0.509 | neutral | None | None | None | None | N |
S/G | 0.1449 | likely_benign | 0.1475 | benign | -0.912 | Destabilizing | 0.525 | D | 0.375 | neutral | None | None | None | None | N |
S/H | 0.2851 | likely_benign | 0.2497 | benign | -1.426 | Destabilizing | 0.998 | D | 0.412 | neutral | None | None | None | None | N |
S/I | 0.1353 | likely_benign | 0.1198 | benign | -0.481 | Destabilizing | 0.949 | D | 0.456 | neutral | None | None | None | None | N |
S/K | 0.5752 | likely_pathogenic | 0.5049 | ambiguous | -0.494 | Destabilizing | 0.842 | D | 0.362 | neutral | None | None | None | None | N |
S/L | 0.0773 | likely_benign | 0.0786 | benign | -0.481 | Destabilizing | 0.669 | D | 0.461 | neutral | N | 0.42462257 | None | None | N |
S/M | 0.1527 | likely_benign | 0.1534 | benign | -0.06 | Destabilizing | 0.991 | D | 0.417 | neutral | None | None | None | None | N |
S/N | 0.1412 | likely_benign | 0.1273 | benign | -0.245 | Destabilizing | 0.842 | D | 0.402 | neutral | None | None | None | None | N |
S/P | 0.799 | likely_pathogenic | 0.8168 | pathogenic | -0.546 | Destabilizing | 0.966 | D | 0.375 | neutral | D | 0.524266703 | None | None | N |
S/Q | 0.4424 | ambiguous | 0.3981 | ambiguous | -0.54 | Destabilizing | 0.974 | D | 0.403 | neutral | None | None | None | None | N |
S/R | 0.4772 | ambiguous | 0.4068 | ambiguous | -0.331 | Destabilizing | 0.949 | D | 0.385 | neutral | None | None | None | None | N |
S/T | 0.0591 | likely_benign | 0.0576 | benign | -0.424 | Destabilizing | 0.007 | N | 0.104 | neutral | N | 0.37819406 | None | None | N |
S/V | 0.1356 | likely_benign | 0.1258 | benign | -0.546 | Destabilizing | 0.728 | D | 0.461 | neutral | None | None | None | None | N |
S/W | 0.2852 | likely_benign | 0.2635 | benign | -1.113 | Destabilizing | 0.998 | D | 0.587 | neutral | None | None | None | None | N |
S/Y | 0.1466 | likely_benign | 0.1359 | benign | -0.872 | Destabilizing | 0.991 | D | 0.505 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.