Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5819 | 17680;17681;17682 | chr2:178731311;178731310;178731309 | chr2:179596038;179596037;179596036 |
N2AB | 5502 | 16729;16730;16731 | chr2:178731311;178731310;178731309 | chr2:179596038;179596037;179596036 |
N2A | 4575 | 13948;13949;13950 | chr2:178731311;178731310;178731309 | chr2:179596038;179596037;179596036 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 1.0 | D | 0.86 | 0.866 | 0.883693953031 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | None | None | 0.997 | N | 0.729 | 0.486 | 0.798797874797 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85905E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7913 | likely_pathogenic | 0.7632 | pathogenic | -1.482 | Destabilizing | 0.999 | D | 0.761 | deleterious | D | 0.574871381 | None | None | N |
V/C | 0.96 | likely_pathogenic | 0.9635 | pathogenic | -1.255 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/D | 0.9913 | likely_pathogenic | 0.9912 | pathogenic | -0.953 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/E | 0.9677 | likely_pathogenic | 0.9698 | pathogenic | -0.952 | Destabilizing | 1.0 | D | 0.86 | deleterious | D | 0.60774768 | None | None | N |
V/F | 0.776 | likely_pathogenic | 0.819 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/G | 0.878 | likely_pathogenic | 0.8684 | pathogenic | -1.784 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.60774768 | None | None | N |
V/H | 0.9919 | likely_pathogenic | 0.9928 | pathogenic | -1.236 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
V/I | 0.1042 | likely_benign | 0.108 | benign | -0.753 | Destabilizing | 0.997 | D | 0.729 | prob.delet. | N | 0.512334139 | None | None | N |
V/K | 0.9759 | likely_pathogenic | 0.9794 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/L | 0.5842 | likely_pathogenic | 0.6684 | pathogenic | -0.753 | Destabilizing | 0.997 | D | 0.763 | deleterious | D | 0.605124225 | None | None | N |
V/M | 0.5773 | likely_pathogenic | 0.6221 | pathogenic | -0.694 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/N | 0.9664 | likely_pathogenic | 0.9671 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
V/P | 0.9662 | likely_pathogenic | 0.9648 | pathogenic | -0.962 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/Q | 0.9637 | likely_pathogenic | 0.9676 | pathogenic | -1.024 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/R | 0.9594 | likely_pathogenic | 0.9645 | pathogenic | -0.584 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
V/S | 0.9097 | likely_pathogenic | 0.8934 | pathogenic | -1.48 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/T | 0.8165 | likely_pathogenic | 0.7983 | pathogenic | -1.363 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
V/W | 0.9938 | likely_pathogenic | 0.995 | pathogenic | -1.325 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/Y | 0.9804 | likely_pathogenic | 0.9839 | pathogenic | -1.025 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.