Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5824 | 17695;17696;17697 | chr2:178731195;178731194;178731193 | chr2:179595922;179595921;179595920 |
N2AB | 5507 | 16744;16745;16746 | chr2:178731195;178731194;178731193 | chr2:179595922;179595921;179595920 |
N2A | 4580 | 13963;13964;13965 | chr2:178731195;178731194;178731193 | chr2:179595922;179595921;179595920 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs750512727 | -0.461 | 0.334 | N | 0.404 | 0.119 | 0.0954503805726 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs750512727 | -0.461 | 0.334 | N | 0.404 | 0.119 | 0.0954503805726 | gnomAD-4.0.0 | 2.0537E-06 | None | None | None | None | N | None | 0 | 2.23914E-05 | None | 0 | 0 | None | 0 | 0 | 1.79972E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0708 | likely_benign | 0.0675 | benign | -0.758 | Destabilizing | 0.334 | N | 0.404 | neutral | N | 0.453186811 | None | None | N |
T/C | 0.3789 | ambiguous | 0.3801 | ambiguous | -0.422 | Destabilizing | 0.992 | D | 0.458 | neutral | None | None | None | None | N |
T/D | 0.3328 | likely_benign | 0.3345 | benign | 0.323 | Stabilizing | 0.447 | N | 0.425 | neutral | None | None | None | None | N |
T/E | 0.2211 | likely_benign | 0.2278 | benign | 0.269 | Stabilizing | 0.021 | N | 0.271 | neutral | None | None | None | None | N |
T/F | 0.1791 | likely_benign | 0.1722 | benign | -1.209 | Destabilizing | 0.972 | D | 0.477 | neutral | None | None | None | None | N |
T/G | 0.2538 | likely_benign | 0.2372 | benign | -0.906 | Destabilizing | 0.617 | D | 0.429 | neutral | None | None | None | None | N |
T/H | 0.1933 | likely_benign | 0.1969 | benign | -1.314 | Destabilizing | 0.92 | D | 0.464 | neutral | None | None | None | None | N |
T/I | 0.1115 | likely_benign | 0.1162 | benign | -0.474 | Destabilizing | 0.896 | D | 0.472 | neutral | N | 0.491147767 | None | None | N |
T/K | 0.1344 | likely_benign | 0.1367 | benign | -0.328 | Destabilizing | 0.007 | N | 0.238 | neutral | N | 0.428675156 | None | None | N |
T/L | 0.0915 | likely_benign | 0.0907 | benign | -0.474 | Destabilizing | 0.617 | D | 0.412 | neutral | None | None | None | None | N |
T/M | 0.081 | likely_benign | 0.0814 | benign | -0.117 | Destabilizing | 0.972 | D | 0.454 | neutral | None | None | None | None | N |
T/N | 0.1156 | likely_benign | 0.114 | benign | -0.141 | Destabilizing | 0.021 | N | 0.225 | neutral | None | None | None | None | N |
T/P | 0.6124 | likely_pathogenic | 0.5794 | pathogenic | -0.541 | Destabilizing | 0.963 | D | 0.461 | neutral | N | 0.480277412 | None | None | N |
T/Q | 0.166 | likely_benign | 0.1673 | benign | -0.41 | Destabilizing | 0.617 | D | 0.431 | neutral | None | None | None | None | N |
T/R | 0.0985 | likely_benign | 0.1029 | benign | -0.142 | Destabilizing | 0.004 | N | 0.331 | neutral | N | 0.436737279 | None | None | N |
T/S | 0.1046 | likely_benign | 0.101 | benign | -0.464 | Destabilizing | 0.334 | N | 0.455 | neutral | N | 0.464459811 | None | None | N |
T/V | 0.0922 | likely_benign | 0.0924 | benign | -0.541 | Destabilizing | 0.766 | D | 0.333 | neutral | None | None | None | None | N |
T/W | 0.533 | ambiguous | 0.5379 | ambiguous | -1.1 | Destabilizing | 0.992 | D | 0.497 | neutral | None | None | None | None | N |
T/Y | 0.2357 | likely_benign | 0.2266 | benign | -0.843 | Destabilizing | 0.972 | D | 0.476 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.