Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5826 | 17701;17702;17703 | chr2:178731189;178731188;178731187 | chr2:179595916;179595915;179595914 |
N2AB | 5509 | 16750;16751;16752 | chr2:178731189;178731188;178731187 | chr2:179595916;179595915;179595914 |
N2A | 4582 | 13969;13970;13971 | chr2:178731189;178731188;178731187 | chr2:179595916;179595915;179595914 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | None | N | 0.189 | 0.079 | 0.0401082797425 | gnomAD-4.0.0 | 1.5927E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02572E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1014 | likely_benign | 0.0866 | benign | -0.643 | Destabilizing | 0.027 | N | 0.25 | neutral | N | 0.470442234 | None | None | N |
T/C | 0.4679 | ambiguous | 0.4135 | ambiguous | -0.458 | Destabilizing | 0.935 | D | 0.309 | neutral | None | None | None | None | N |
T/D | 0.4152 | ambiguous | 0.3248 | benign | 0.025 | Stabilizing | 0.081 | N | 0.321 | neutral | None | None | None | None | N |
T/E | 0.2502 | likely_benign | 0.1987 | benign | -0.008 | Destabilizing | 0.005 | N | 0.137 | neutral | None | None | None | None | N |
T/F | 0.2406 | likely_benign | 0.1693 | benign | -0.848 | Destabilizing | 0.38 | N | 0.341 | neutral | None | None | None | None | N |
T/G | 0.322 | likely_benign | 0.2526 | benign | -0.855 | Destabilizing | 0.149 | N | 0.296 | neutral | None | None | None | None | N |
T/H | 0.2943 | likely_benign | 0.2306 | benign | -1.139 | Destabilizing | 0.935 | D | 0.304 | neutral | None | None | None | None | N |
T/I | 0.094 | likely_benign | 0.0693 | benign | -0.188 | Destabilizing | None | N | 0.189 | neutral | N | 0.424096055 | None | None | N |
T/K | 0.1589 | likely_benign | 0.1389 | benign | -0.636 | Destabilizing | 0.149 | N | 0.321 | neutral | None | None | None | None | N |
T/L | 0.0786 | likely_benign | 0.0643 | benign | -0.188 | Destabilizing | 0.012 | N | 0.278 | neutral | None | None | None | None | N |
T/M | 0.0782 | likely_benign | 0.0661 | benign | 0.035 | Stabilizing | 0.012 | N | 0.275 | neutral | None | None | None | None | N |
T/N | 0.1656 | likely_benign | 0.1279 | benign | -0.509 | Destabilizing | 0.484 | N | 0.341 | neutral | N | 0.471456192 | None | None | N |
T/P | 0.3441 | ambiguous | 0.2912 | benign | -0.308 | Destabilizing | 0.741 | D | 0.361 | neutral | N | 0.471709682 | None | None | N |
T/Q | 0.21 | likely_benign | 0.1767 | benign | -0.709 | Destabilizing | 0.38 | N | 0.349 | neutral | None | None | None | None | N |
T/R | 0.1312 | likely_benign | 0.1145 | benign | -0.371 | Destabilizing | 0.38 | N | 0.355 | neutral | None | None | None | None | N |
T/S | 0.1382 | likely_benign | 0.1135 | benign | -0.782 | Destabilizing | 0.117 | N | 0.231 | neutral | N | 0.478527973 | None | None | N |
T/V | 0.0943 | likely_benign | 0.074 | benign | -0.308 | Destabilizing | None | N | 0.081 | neutral | None | None | None | None | N |
T/W | 0.5546 | ambiguous | 0.4507 | ambiguous | -0.784 | Destabilizing | 0.935 | D | 0.376 | neutral | None | None | None | None | N |
T/Y | 0.3254 | likely_benign | 0.2514 | benign | -0.549 | Destabilizing | 0.555 | D | 0.329 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.