Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5828 | 17707;17708;17709 | chr2:178731183;178731182;178731181 | chr2:179595910;179595909;179595908 |
N2AB | 5511 | 16756;16757;16758 | chr2:178731183;178731182;178731181 | chr2:179595910;179595909;179595908 |
N2A | 4584 | 13975;13976;13977 | chr2:178731183;178731182;178731181 | chr2:179595910;179595909;179595908 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2080414407 | None | 0.011 | N | 0.145 | 0.162 | 0.322786055943 | gnomAD-4.0.0 | 1.59254E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86087E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1035 | likely_benign | 0.1096 | benign | -0.472 | Destabilizing | 0.896 | D | 0.501 | neutral | N | 0.49378908 | None | None | N |
E/C | 0.8137 | likely_pathogenic | 0.8472 | pathogenic | -0.131 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/D | 0.1539 | likely_benign | 0.1605 | benign | -0.506 | Destabilizing | 0.896 | D | 0.476 | neutral | N | 0.486795647 | None | None | N |
E/F | 0.7534 | likely_pathogenic | 0.7788 | pathogenic | -0.242 | Destabilizing | 0.996 | D | 0.633 | neutral | None | None | None | None | N |
E/G | 0.1213 | likely_benign | 0.1448 | benign | -0.717 | Destabilizing | 0.896 | D | 0.563 | neutral | N | 0.487287182 | None | None | N |
E/H | 0.4547 | ambiguous | 0.4793 | ambiguous | -0.195 | Destabilizing | 0.988 | D | 0.557 | neutral | None | None | None | None | N |
E/I | 0.3694 | ambiguous | 0.3826 | ambiguous | 0.154 | Stabilizing | 0.988 | D | 0.636 | neutral | None | None | None | None | N |
E/K | 0.0789 | likely_benign | 0.0862 | benign | 0.102 | Stabilizing | 0.011 | N | 0.145 | neutral | N | 0.418597888 | None | None | N |
E/L | 0.3465 | ambiguous | 0.3704 | ambiguous | 0.154 | Stabilizing | 0.919 | D | 0.542 | neutral | None | None | None | None | N |
E/M | 0.3716 | ambiguous | 0.387 | ambiguous | 0.281 | Stabilizing | 0.999 | D | 0.624 | neutral | None | None | None | None | N |
E/N | 0.2311 | likely_benign | 0.2564 | benign | -0.241 | Destabilizing | 0.919 | D | 0.519 | neutral | None | None | None | None | N |
E/P | 0.3011 | likely_benign | 0.331 | benign | -0.034 | Destabilizing | 0.988 | D | 0.556 | neutral | None | None | None | None | N |
E/Q | 0.123 | likely_benign | 0.1212 | benign | -0.182 | Destabilizing | 0.251 | N | 0.214 | neutral | N | 0.454462688 | None | None | N |
E/R | 0.1755 | likely_benign | 0.1907 | benign | 0.317 | Stabilizing | 0.851 | D | 0.493 | neutral | None | None | None | None | N |
E/S | 0.1878 | likely_benign | 0.2058 | benign | -0.42 | Destabilizing | 0.919 | D | 0.487 | neutral | None | None | None | None | N |
E/T | 0.174 | likely_benign | 0.1834 | benign | -0.224 | Destabilizing | 0.919 | D | 0.542 | neutral | None | None | None | None | N |
E/V | 0.1973 | likely_benign | 0.2049 | benign | -0.034 | Destabilizing | 0.984 | D | 0.544 | neutral | D | 0.523591912 | None | None | N |
E/W | 0.8845 | likely_pathogenic | 0.9012 | pathogenic | -0.064 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/Y | 0.579 | likely_pathogenic | 0.6144 | pathogenic | 0.002 | Stabilizing | 0.996 | D | 0.63 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.