Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5829 | 17710;17711;17712 | chr2:178731180;178731179;178731178 | chr2:179595907;179595906;179595905 |
N2AB | 5512 | 16759;16760;16761 | chr2:178731180;178731179;178731178 | chr2:179595907;179595906;179595905 |
N2A | 4585 | 13978;13979;13980 | chr2:178731180;178731179;178731178 | chr2:179595907;179595906;179595905 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.978 | N | 0.557 | 0.29 | 0.252162846088 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
A/V | None | None | 0.978 | N | 0.528 | 0.262 | 0.38342384377 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7906 | likely_pathogenic | 0.7975 | pathogenic | -0.851 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
A/D | 0.8812 | likely_pathogenic | 0.8721 | pathogenic | -0.911 | Destabilizing | 0.997 | D | 0.781 | deleterious | N | 0.49930589 | None | None | N |
A/E | 0.868 | likely_pathogenic | 0.8536 | pathogenic | -0.964 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
A/F | 0.8705 | likely_pathogenic | 0.8524 | pathogenic | -0.926 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
A/G | 0.2968 | likely_benign | 0.292 | benign | -0.979 | Destabilizing | 0.989 | D | 0.487 | neutral | N | 0.510349603 | None | None | N |
A/H | 0.9606 | likely_pathogenic | 0.9542 | pathogenic | -1.175 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
A/I | 0.5807 | likely_pathogenic | 0.5955 | pathogenic | -0.287 | Destabilizing | 0.995 | D | 0.72 | prob.delet. | None | None | None | None | N |
A/K | 0.965 | likely_pathogenic | 0.9622 | pathogenic | -1.125 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
A/L | 0.4726 | ambiguous | 0.4567 | ambiguous | -0.287 | Destabilizing | 0.269 | N | 0.431 | neutral | None | None | None | None | N |
A/M | 0.5378 | ambiguous | 0.5406 | ambiguous | -0.287 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
A/N | 0.8054 | likely_pathogenic | 0.7973 | pathogenic | -0.814 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
A/P | 0.2825 | likely_benign | 0.2803 | benign | -0.399 | Destabilizing | 0.998 | D | 0.749 | deleterious | N | 0.409065101 | None | None | N |
A/Q | 0.9116 | likely_pathogenic | 0.8974 | pathogenic | -0.976 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
A/R | 0.9482 | likely_pathogenic | 0.9414 | pathogenic | -0.787 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
A/S | 0.2526 | likely_benign | 0.2499 | benign | -1.136 | Destabilizing | 0.889 | D | 0.35 | neutral | N | 0.447876992 | None | None | N |
A/T | 0.223 | likely_benign | 0.2495 | benign | -1.091 | Destabilizing | 0.978 | D | 0.557 | neutral | N | 0.4694257 | None | None | N |
A/V | 0.2832 | likely_benign | 0.2995 | benign | -0.399 | Destabilizing | 0.978 | D | 0.528 | neutral | N | 0.458272554 | None | None | N |
A/W | 0.9819 | likely_pathogenic | 0.978 | pathogenic | -1.24 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
A/Y | 0.9366 | likely_pathogenic | 0.9244 | pathogenic | -0.838 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.