Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC583117716;17717;17718 chr2:178731174;178731173;178731172chr2:179595901;179595900;179595899
N2AB551416765;16766;16767 chr2:178731174;178731173;178731172chr2:179595901;179595900;179595899
N2A458713984;13985;13986 chr2:178731174;178731173;178731172chr2:179595901;179595900;179595899
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: TCT
  • RefSeq wild type template codon: AGA
  • Domain: Ig-42
  • Domain position: 9
  • Structural Position: 11
  • Q(SASA): 0.3574
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/Y rs760944340 -0.523 1.0 N 0.805 0.364 0.622579596728 gnomAD-2.1.1 4.02E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.88E-06 0
S/Y rs760944340 -0.523 1.0 N 0.805 0.364 0.622579596728 gnomAD-4.0.0 1.36868E-06 None None None None N None 0 0 None 0 0 None 0 0 1.79925E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.0897 likely_benign 0.1031 benign -0.318 Destabilizing 0.997 D 0.414 neutral N 0.510928393 None None N
S/C 0.1844 likely_benign 0.2413 benign -0.317 Destabilizing 1.0 D 0.748 deleterious N 0.485472297 None None N
S/D 0.3583 ambiguous 0.4198 ambiguous 0.232 Stabilizing 0.999 D 0.629 neutral None None None None N
S/E 0.646 likely_pathogenic 0.7026 pathogenic 0.171 Stabilizing 0.999 D 0.617 neutral None None None None N
S/F 0.3865 ambiguous 0.4473 ambiguous -0.755 Destabilizing 1.0 D 0.812 deleterious N 0.484711829 None None N
S/G 0.1138 likely_benign 0.125 benign -0.483 Destabilizing 0.999 D 0.492 neutral None None None None N
S/H 0.5605 ambiguous 0.5956 pathogenic -0.957 Destabilizing 1.0 D 0.765 deleterious None None None None N
S/I 0.3806 ambiguous 0.4544 ambiguous -0.01 Destabilizing 1.0 D 0.801 deleterious None None None None N
S/K 0.8602 likely_pathogenic 0.8967 pathogenic -0.506 Destabilizing 0.999 D 0.614 neutral None None None None N
S/L 0.1632 likely_benign 0.1898 benign -0.01 Destabilizing 1.0 D 0.72 prob.delet. None None None None N
S/M 0.3348 likely_benign 0.3811 ambiguous 0.073 Stabilizing 1.0 D 0.763 deleterious None None None None N
S/N 0.1671 likely_benign 0.1911 benign -0.294 Destabilizing 0.999 D 0.609 neutral None None None None N
S/P 0.106 likely_benign 0.1196 benign -0.08 Destabilizing 1.0 D 0.817 deleterious N 0.488243534 None None N
S/Q 0.7113 likely_pathogenic 0.7455 pathogenic -0.464 Destabilizing 1.0 D 0.733 prob.delet. None None None None N
S/R 0.7954 likely_pathogenic 0.8412 pathogenic -0.357 Destabilizing 1.0 D 0.818 deleterious None None None None N
S/T 0.1015 likely_benign 0.1127 benign -0.359 Destabilizing 0.999 D 0.467 neutral N 0.453730331 None None N
S/V 0.3527 ambiguous 0.4119 ambiguous -0.08 Destabilizing 1.0 D 0.791 deleterious None None None None N
S/W 0.5586 ambiguous 0.5696 pathogenic -0.786 Destabilizing 1.0 D 0.769 deleterious None None None None N
S/Y 0.3499 ambiguous 0.4014 ambiguous -0.493 Destabilizing 1.0 D 0.805 deleterious N 0.484965318 None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.