Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5832 | 17719;17720;17721 | chr2:178731171;178731170;178731169 | chr2:179595898;179595897;179595896 |
N2AB | 5515 | 16768;16769;16770 | chr2:178731171;178731170;178731169 | chr2:179595898;179595897;179595896 |
N2A | 4588 | 13987;13988;13989 | chr2:178731171;178731170;178731169 | chr2:179595898;179595897;179595896 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1222549953 | -1.001 | 0.103 | N | 0.255 | 0.223 | 0.591820399129 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11383E-04 | None | 0 | None | 0 | 0 | 1.65837E-04 |
I/T | rs1222549953 | -1.001 | 0.103 | N | 0.255 | 0.223 | 0.591820399129 | gnomAD-4.0.0 | 2.73726E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.03931E-05 | None | 0 | 0 | 1.7992E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2683 | likely_benign | 0.3186 | benign | -1.468 | Destabilizing | 0.702 | D | 0.473 | neutral | None | None | None | None | N |
I/C | 0.7756 | likely_pathogenic | 0.8442 | pathogenic | -0.927 | Destabilizing | 0.999 | D | 0.492 | neutral | None | None | None | None | N |
I/D | 0.8413 | likely_pathogenic | 0.9103 | pathogenic | -0.745 | Destabilizing | 0.988 | D | 0.594 | neutral | None | None | None | None | N |
I/E | 0.6462 | likely_pathogenic | 0.7328 | pathogenic | -0.758 | Destabilizing | 0.988 | D | 0.59 | neutral | None | None | None | None | N |
I/F | 0.2113 | likely_benign | 0.2808 | benign | -1.052 | Destabilizing | 0.988 | D | 0.431 | neutral | None | None | None | None | N |
I/G | 0.7367 | likely_pathogenic | 0.824 | pathogenic | -1.777 | Destabilizing | 0.988 | D | 0.547 | neutral | None | None | None | None | N |
I/H | 0.7059 | likely_pathogenic | 0.7866 | pathogenic | -1.025 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
I/K | 0.4469 | ambiguous | 0.554 | ambiguous | -0.962 | Destabilizing | 0.984 | D | 0.592 | neutral | N | 0.505931658 | None | None | N |
I/L | 0.1296 | likely_benign | 0.1541 | benign | -0.706 | Destabilizing | 0.437 | N | 0.324 | neutral | N | 0.465525043 | None | None | N |
I/M | 0.083 | likely_benign | 0.0972 | benign | -0.559 | Destabilizing | 0.984 | D | 0.429 | neutral | N | 0.470298932 | None | None | N |
I/N | 0.5086 | ambiguous | 0.6414 | pathogenic | -0.729 | Destabilizing | 0.988 | D | 0.617 | neutral | None | None | None | None | N |
I/P | 0.9032 | likely_pathogenic | 0.9451 | pathogenic | -0.927 | Destabilizing | 0.996 | D | 0.617 | neutral | None | None | None | None | N |
I/Q | 0.5488 | ambiguous | 0.62 | pathogenic | -0.908 | Destabilizing | 0.996 | D | 0.631 | neutral | None | None | None | None | N |
I/R | 0.3572 | ambiguous | 0.4559 | ambiguous | -0.406 | Destabilizing | 0.984 | D | 0.619 | neutral | D | 0.525133494 | None | None | N |
I/S | 0.3851 | ambiguous | 0.4739 | ambiguous | -1.354 | Destabilizing | 0.851 | D | 0.507 | neutral | None | None | None | None | N |
I/T | 0.1247 | likely_benign | 0.1614 | benign | -1.247 | Destabilizing | 0.103 | N | 0.255 | neutral | N | 0.455310837 | None | None | N |
I/V | 0.0717 | likely_benign | 0.0759 | benign | -0.927 | Destabilizing | 0.011 | N | 0.103 | neutral | N | 0.415805512 | None | None | N |
I/W | 0.8016 | likely_pathogenic | 0.8622 | pathogenic | -1.1 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
I/Y | 0.6736 | likely_pathogenic | 0.7576 | pathogenic | -0.874 | Destabilizing | 0.996 | D | 0.499 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.