Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5836 | 17731;17732;17733 | chr2:178731159;178731158;178731157 | chr2:179595886;179595885;179595884 |
N2AB | 5519 | 16780;16781;16782 | chr2:178731159;178731158;178731157 | chr2:179595886;179595885;179595884 |
N2A | 4592 | 13999;14000;14001 | chr2:178731159;178731158;178731157 | chr2:179595886;179595885;179595884 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | 0.001 | N | 0.118 | 0.112 | 0.280987212366 | gnomAD-4.0.0 | 1.59151E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02462E-05 |
Q/R | rs760072345 | 0.207 | 0.351 | N | 0.243 | 0.115 | 0.107399877778 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
Q/R | rs760072345 | 0.207 | 0.351 | N | 0.243 | 0.115 | 0.107399877778 | gnomAD-4.0.0 | 3.18301E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71775E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1251 | likely_benign | 0.1278 | benign | -0.387 | Destabilizing | 0.228 | N | 0.327 | neutral | None | None | None | None | N |
Q/C | 0.4685 | ambiguous | 0.577 | pathogenic | 0.246 | Stabilizing | 0.983 | D | 0.344 | neutral | None | None | None | None | N |
Q/D | 0.3554 | ambiguous | 0.4173 | ambiguous | -0.44 | Destabilizing | 0.129 | N | 0.219 | neutral | None | None | None | None | N |
Q/E | 0.0554 | likely_benign | 0.0578 | benign | -0.438 | Destabilizing | 0.001 | N | 0.063 | neutral | N | 0.376029963 | None | None | N |
Q/F | 0.6131 | likely_pathogenic | 0.6853 | pathogenic | -0.449 | Destabilizing | 0.716 | D | 0.421 | neutral | None | None | None | None | N |
Q/G | 0.2251 | likely_benign | 0.2634 | benign | -0.641 | Destabilizing | 0.418 | N | 0.381 | neutral | None | None | None | None | N |
Q/H | 0.1733 | likely_benign | 0.2287 | benign | -0.678 | Destabilizing | 0.002 | N | 0.209 | neutral | N | 0.482162924 | None | None | N |
Q/I | 0.278 | likely_benign | 0.3121 | benign | 0.213 | Stabilizing | 0.264 | N | 0.404 | neutral | None | None | None | None | N |
Q/K | 0.0864 | likely_benign | 0.094 | benign | -0.12 | Destabilizing | 0.101 | N | 0.288 | neutral | N | 0.417823444 | None | None | N |
Q/L | 0.122 | likely_benign | 0.1363 | benign | 0.213 | Stabilizing | 0.001 | N | 0.118 | neutral | N | 0.442815102 | None | None | N |
Q/M | 0.2985 | likely_benign | 0.3131 | benign | 0.738 | Stabilizing | 0.716 | D | 0.253 | neutral | None | None | None | None | N |
Q/N | 0.2723 | likely_benign | 0.3223 | benign | -0.471 | Destabilizing | 0.264 | N | 0.215 | neutral | None | None | None | None | N |
Q/P | 0.1767 | likely_benign | 0.2259 | benign | 0.043 | Stabilizing | 0.523 | D | 0.401 | neutral | N | 0.449511788 | None | None | N |
Q/R | 0.0966 | likely_benign | 0.1058 | benign | 0.038 | Stabilizing | 0.351 | N | 0.243 | neutral | N | 0.454264247 | None | None | N |
Q/S | 0.1988 | likely_benign | 0.2234 | benign | -0.478 | Destabilizing | 0.228 | N | 0.22 | neutral | None | None | None | None | N |
Q/T | 0.1726 | likely_benign | 0.1908 | benign | -0.311 | Destabilizing | 0.418 | N | 0.343 | neutral | None | None | None | None | N |
Q/V | 0.1642 | likely_benign | 0.1768 | benign | 0.043 | Stabilizing | 0.01 | N | 0.141 | neutral | None | None | None | None | N |
Q/W | 0.5323 | ambiguous | 0.5791 | pathogenic | -0.375 | Destabilizing | 0.983 | D | 0.345 | neutral | None | None | None | None | N |
Q/Y | 0.3767 | ambiguous | 0.4483 | ambiguous | -0.138 | Destabilizing | 0.264 | N | 0.431 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.