Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5837 | 17734;17735;17736 | chr2:178731156;178731155;178731154 | chr2:179595883;179595882;179595881 |
N2AB | 5520 | 16783;16784;16785 | chr2:178731156;178731155;178731154 | chr2:179595883;179595882;179595881 |
N2A | 4593 | 14002;14003;14004 | chr2:178731156;178731155;178731154 | chr2:179595883;179595882;179595881 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.085 | D | 0.468 | 0.665 | 0.7096256102 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4907 | ambiguous | 0.5615 | ambiguous | -0.415 | Destabilizing | 0.928 | D | 0.679 | prob.neutral | D | 0.590858587 | None | None | N |
G/C | 0.6974 | likely_pathogenic | 0.7845 | pathogenic | -0.911 | Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | N |
G/D | 0.4185 | ambiguous | 0.4923 | ambiguous | -0.874 | Destabilizing | 0.983 | D | 0.775 | deleterious | None | None | None | None | N |
G/E | 0.5295 | ambiguous | 0.6344 | pathogenic | -1.042 | Destabilizing | 0.978 | D | 0.768 | deleterious | D | 0.576444736 | None | None | N |
G/F | 0.9116 | likely_pathogenic | 0.9336 | pathogenic | -1.222 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
G/H | 0.7491 | likely_pathogenic | 0.7883 | pathogenic | -0.625 | Destabilizing | 0.998 | D | 0.784 | deleterious | None | None | None | None | N |
G/I | 0.9234 | likely_pathogenic | 0.9523 | pathogenic | -0.574 | Destabilizing | 0.998 | D | 0.792 | deleterious | None | None | None | None | N |
G/K | 0.7008 | likely_pathogenic | 0.7765 | pathogenic | -0.802 | Destabilizing | 0.968 | D | 0.777 | deleterious | None | None | None | None | N |
G/L | 0.8594 | likely_pathogenic | 0.8815 | pathogenic | -0.574 | Destabilizing | 0.983 | D | 0.761 | deleterious | None | None | None | None | N |
G/M | 0.8655 | likely_pathogenic | 0.9019 | pathogenic | -0.407 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
G/N | 0.4812 | ambiguous | 0.5148 | ambiguous | -0.51 | Destabilizing | 0.983 | D | 0.751 | deleterious | None | None | None | None | N |
G/P | 0.9951 | likely_pathogenic | 0.9968 | pathogenic | -0.489 | Destabilizing | 0.997 | D | 0.785 | deleterious | None | None | None | None | N |
G/Q | 0.6455 | likely_pathogenic | 0.7041 | pathogenic | -0.864 | Destabilizing | 0.983 | D | 0.785 | deleterious | None | None | None | None | N |
G/R | 0.6217 | likely_pathogenic | 0.6946 | pathogenic | -0.31 | Destabilizing | 0.085 | N | 0.468 | neutral | D | 0.574808865 | None | None | N |
G/S | 0.2964 | likely_benign | 0.3486 | ambiguous | -0.631 | Destabilizing | 0.983 | D | 0.759 | deleterious | None | None | None | None | N |
G/T | 0.5996 | likely_pathogenic | 0.6778 | pathogenic | -0.742 | Destabilizing | 0.983 | D | 0.766 | deleterious | None | None | None | None | N |
G/V | 0.8436 | likely_pathogenic | 0.8975 | pathogenic | -0.489 | Destabilizing | 0.989 | D | 0.776 | deleterious | D | 0.623533082 | None | None | N |
G/W | 0.8181 | likely_pathogenic | 0.8719 | pathogenic | -1.335 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
G/Y | 0.8161 | likely_pathogenic | 0.8556 | pathogenic | -0.991 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.