Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5838 | 17737;17738;17739 | chr2:178731153;178731152;178731151 | chr2:179595880;179595879;179595878 |
N2AB | 5521 | 16786;16787;16788 | chr2:178731153;178731152;178731151 | chr2:179595880;179595879;179595878 |
N2A | 4594 | 14005;14006;14007 | chr2:178731153;178731152;178731151 | chr2:179595880;179595879;179595878 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs772883729 | -0.359 | 1.0 | N | 0.763 | 0.523 | None | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88281E-05 | 0 | 0 | 0 | 0 |
D/E | None | None | 1.0 | N | 0.407 | 0.223 | 0.165133752707 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5062 | ambiguous | 0.5915 | pathogenic | -0.357 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.460175566 | None | None | N |
D/C | 0.8962 | likely_pathogenic | 0.9471 | pathogenic | 0.222 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
D/E | 0.3831 | ambiguous | 0.5167 | ambiguous | -0.346 | Destabilizing | 1.0 | D | 0.407 | neutral | N | 0.466710682 | None | None | N |
D/F | 0.7429 | likely_pathogenic | 0.8234 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
D/G | 0.6393 | likely_pathogenic | 0.7685 | pathogenic | -0.541 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.504943783 | None | None | N |
D/H | 0.6256 | likely_pathogenic | 0.676 | pathogenic | -0.545 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.463240212 | None | None | N |
D/I | 0.6304 | likely_pathogenic | 0.762 | pathogenic | 0.076 | Stabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
D/K | 0.7318 | likely_pathogenic | 0.7934 | pathogenic | 0.361 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
D/L | 0.6395 | likely_pathogenic | 0.7455 | pathogenic | 0.076 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
D/M | 0.7875 | likely_pathogenic | 0.8626 | pathogenic | 0.409 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
D/N | 0.1993 | likely_benign | 0.2593 | benign | 0.135 | Stabilizing | 1.0 | D | 0.648 | neutral | N | 0.50025004 | None | None | N |
D/P | 0.9845 | likely_pathogenic | 0.9912 | pathogenic | -0.047 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
D/Q | 0.6652 | likely_pathogenic | 0.7334 | pathogenic | 0.144 | Stabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
D/R | 0.7888 | likely_pathogenic | 0.8357 | pathogenic | 0.358 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
D/S | 0.3339 | likely_benign | 0.4032 | ambiguous | 0.034 | Stabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
D/T | 0.6197 | likely_pathogenic | 0.7155 | pathogenic | 0.175 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
D/V | 0.4922 | ambiguous | 0.6234 | pathogenic | -0.047 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.477990332 | None | None | N |
D/W | 0.9612 | likely_pathogenic | 0.973 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
D/Y | 0.3844 | ambiguous | 0.4768 | ambiguous | -0.285 | Destabilizing | 1.0 | D | 0.782 | deleterious | N | 0.495676514 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.