Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5839 | 17740;17741;17742 | chr2:178731150;178731149;178731148 | chr2:179595877;179595876;179595875 |
N2AB | 5522 | 16789;16790;16791 | chr2:178731150;178731149;178731148 | chr2:179595877;179595876;179595875 |
N2A | 4595 | 14008;14009;14010 | chr2:178731150;178731149;178731148 | chr2:179595877;179595876;179595875 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.999 | N | 0.78 | 0.385 | 0.536804958393 | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | N | None | 5.66059E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | None | None | 0.998 | N | 0.736 | 0.298 | 0.143124449307 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1182 | likely_benign | 0.1515 | benign | -0.931 | Destabilizing | 0.996 | D | 0.597 | neutral | N | 0.48941697 | None | None | N |
P/C | 0.6901 | likely_pathogenic | 0.8445 | pathogenic | -0.768 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
P/D | 0.6851 | likely_pathogenic | 0.829 | pathogenic | -0.556 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
P/E | 0.502 | ambiguous | 0.6921 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
P/F | 0.6412 | likely_pathogenic | 0.7968 | pathogenic | -0.977 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
P/G | 0.5432 | ambiguous | 0.683 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
P/H | 0.3598 | ambiguous | 0.5532 | ambiguous | -0.613 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
P/I | 0.4049 | ambiguous | 0.5595 | ambiguous | -0.523 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
P/K | 0.5881 | likely_pathogenic | 0.7902 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
P/L | 0.177 | likely_benign | 0.2984 | benign | -0.523 | Destabilizing | 0.999 | D | 0.78 | deleterious | N | 0.504309065 | None | None | N |
P/M | 0.4044 | ambiguous | 0.5517 | ambiguous | -0.379 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/N | 0.5103 | ambiguous | 0.6812 | pathogenic | -0.378 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
P/Q | 0.3376 | likely_benign | 0.518 | ambiguous | -0.653 | Destabilizing | 1.0 | D | 0.836 | deleterious | N | 0.452489337 | None | None | N |
P/R | 0.3913 | ambiguous | 0.604 | pathogenic | -0.088 | Destabilizing | 0.999 | D | 0.837 | deleterious | N | 0.486550024 | None | None | N |
P/S | 0.2074 | likely_benign | 0.2965 | benign | -0.855 | Destabilizing | 0.998 | D | 0.736 | prob.delet. | N | 0.460688787 | None | None | N |
P/T | 0.1423 | likely_benign | 0.2061 | benign | -0.836 | Destabilizing | 0.884 | D | 0.368 | neutral | N | 0.430693954 | None | None | N |
P/V | 0.2924 | likely_benign | 0.4121 | ambiguous | -0.622 | Destabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | N |
P/W | 0.8348 | likely_pathogenic | 0.9207 | pathogenic | -1.031 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
P/Y | 0.6524 | likely_pathogenic | 0.8098 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.