Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5843 | 17752;17753;17754 | chr2:178731138;178731137;178731136 | chr2:179595865;179595864;179595863 |
N2AB | 5526 | 16801;16802;16803 | chr2:178731138;178731137;178731136 | chr2:179595865;179595864;179595863 |
N2A | 4599 | 14020;14021;14022 | chr2:178731138;178731137;178731136 | chr2:179595865;179595864;179595863 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs2080404318 | None | 0.988 | N | 0.501 | 0.315 | 0.303781844768 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
Q/K | rs894175460 | None | 0.826 | N | 0.445 | 0.253 | 0.19670166235 | gnomAD-4.0.0 | 1.59146E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0248E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2902 | likely_benign | 0.3472 | ambiguous | -0.775 | Destabilizing | 0.863 | D | 0.431 | neutral | None | None | None | None | N |
Q/C | 0.784 | likely_pathogenic | 0.8635 | pathogenic | -0.206 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
Q/D | 0.5289 | ambiguous | 0.6614 | pathogenic | -0.827 | Destabilizing | 0.759 | D | 0.42 | neutral | None | None | None | None | N |
Q/E | 0.0742 | likely_benign | 0.0893 | benign | -0.691 | Destabilizing | 0.021 | N | 0.207 | neutral | N | 0.410882482 | None | None | N |
Q/F | 0.811 | likely_pathogenic | 0.8472 | pathogenic | -0.321 | Destabilizing | 0.997 | D | 0.583 | neutral | None | None | None | None | N |
Q/G | 0.4247 | ambiguous | 0.5318 | ambiguous | -1.165 | Destabilizing | 0.863 | D | 0.497 | neutral | None | None | None | None | N |
Q/H | 0.3228 | likely_benign | 0.4162 | ambiguous | -0.924 | Destabilizing | 0.988 | D | 0.501 | neutral | N | 0.502987353 | None | None | N |
Q/I | 0.4825 | ambiguous | 0.54 | ambiguous | 0.241 | Stabilizing | 0.997 | D | 0.591 | neutral | None | None | None | None | N |
Q/K | 0.1515 | likely_benign | 0.1886 | benign | -0.455 | Destabilizing | 0.826 | D | 0.445 | neutral | N | 0.482494651 | None | None | N |
Q/L | 0.1894 | likely_benign | 0.2313 | benign | 0.241 | Stabilizing | 0.959 | D | 0.528 | neutral | N | 0.521495756 | None | None | N |
Q/M | 0.4403 | ambiguous | 0.4838 | ambiguous | 0.625 | Stabilizing | 0.997 | D | 0.503 | neutral | None | None | None | None | N |
Q/N | 0.4024 | ambiguous | 0.5129 | ambiguous | -1.066 | Destabilizing | 0.17 | N | 0.209 | neutral | None | None | None | None | N |
Q/P | 0.5179 | ambiguous | 0.6127 | pathogenic | -0.067 | Destabilizing | 0.986 | D | 0.555 | neutral | D | 0.527595009 | None | None | N |
Q/R | 0.1622 | likely_benign | 0.1969 | benign | -0.424 | Destabilizing | 0.92 | D | 0.401 | neutral | N | 0.486228389 | None | None | N |
Q/S | 0.3466 | ambiguous | 0.4067 | ambiguous | -1.212 | Destabilizing | 0.863 | D | 0.399 | neutral | None | None | None | None | N |
Q/T | 0.2511 | likely_benign | 0.2943 | benign | -0.877 | Destabilizing | 0.939 | D | 0.451 | neutral | None | None | None | None | N |
Q/V | 0.3295 | likely_benign | 0.3669 | ambiguous | -0.067 | Destabilizing | 0.969 | D | 0.569 | neutral | None | None | None | None | N |
Q/W | 0.7257 | likely_pathogenic | 0.7757 | pathogenic | -0.185 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
Q/Y | 0.619 | likely_pathogenic | 0.6963 | pathogenic | 0.049 | Stabilizing | 0.997 | D | 0.567 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.