Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5846 | 17761;17762;17763 | chr2:178731129;178731128;178731127 | chr2:179595856;179595855;179595854 |
N2AB | 5529 | 16810;16811;16812 | chr2:178731129;178731128;178731127 | chr2:179595856;179595855;179595854 |
N2A | 4602 | 14029;14030;14031 | chr2:178731129;178731128;178731127 | chr2:179595856;179595855;179595854 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.978 | N | 0.635 | 0.277 | 0.405012372841 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9619 | likely_pathogenic | 0.9518 | pathogenic | -3.245 | Highly Destabilizing | 0.992 | D | 0.751 | deleterious | None | None | None | None | N |
F/C | 0.7495 | likely_pathogenic | 0.7297 | pathogenic | -2.227 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.494024122 | None | None | N |
F/D | 0.9976 | likely_pathogenic | 0.9972 | pathogenic | -3.448 | Highly Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | N |
F/E | 0.9968 | likely_pathogenic | 0.9962 | pathogenic | -3.254 | Highly Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
F/G | 0.9881 | likely_pathogenic | 0.9844 | pathogenic | -3.64 | Highly Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
F/H | 0.9576 | likely_pathogenic | 0.9509 | pathogenic | -2.207 | Highly Destabilizing | 0.995 | D | 0.771 | deleterious | None | None | None | None | N |
F/I | 0.5797 | likely_pathogenic | 0.4775 | ambiguous | -1.94 | Destabilizing | 0.997 | D | 0.716 | prob.delet. | N | 0.459844291 | None | None | N |
F/K | 0.9957 | likely_pathogenic | 0.9945 | pathogenic | -2.189 | Highly Destabilizing | 0.998 | D | 0.846 | deleterious | None | None | None | None | N |
F/L | 0.9798 | likely_pathogenic | 0.9702 | pathogenic | -1.94 | Destabilizing | 0.978 | D | 0.635 | neutral | N | 0.486553676 | None | None | N |
F/M | 0.8906 | likely_pathogenic | 0.8601 | pathogenic | -1.851 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
F/N | 0.9853 | likely_pathogenic | 0.9836 | pathogenic | -2.594 | Highly Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
F/P | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -2.388 | Highly Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
F/Q | 0.992 | likely_pathogenic | 0.9909 | pathogenic | -2.596 | Highly Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
F/R | 0.9879 | likely_pathogenic | 0.9863 | pathogenic | -1.674 | Destabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
F/S | 0.9668 | likely_pathogenic | 0.9609 | pathogenic | -3.203 | Highly Destabilizing | 0.997 | D | 0.814 | deleterious | N | 0.483726802 | None | None | N |
F/T | 0.9685 | likely_pathogenic | 0.9595 | pathogenic | -2.904 | Highly Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
F/V | 0.5351 | ambiguous | 0.4805 | ambiguous | -2.388 | Highly Destabilizing | 0.978 | D | 0.732 | prob.delet. | N | 0.394459087 | None | None | N |
F/W | 0.846 | likely_pathogenic | 0.7931 | pathogenic | -0.719 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
F/Y | 0.2611 | likely_benign | 0.2203 | benign | -1.162 | Destabilizing | 0.37 | N | 0.249 | neutral | N | 0.487940543 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.