Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5849 | 17770;17771;17772 | chr2:178731120;178731119;178731118 | chr2:179595847;179595846;179595845 |
N2AB | 5532 | 16819;16820;16821 | chr2:178731120;178731119;178731118 | chr2:179595847;179595846;179595845 |
N2A | 4605 | 14038;14039;14040 | chr2:178731120;178731119;178731118 | chr2:179595847;179595846;179595845 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | N | 0.761 | 0.427 | 0.648752727461 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2618 | likely_benign | 0.314 | benign | -0.331 | Destabilizing | 0.999 | D | 0.58 | neutral | D | 0.529787166 | None | None | N |
T/C | 0.8709 | likely_pathogenic | 0.8877 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
T/D | 0.6721 | likely_pathogenic | 0.6853 | pathogenic | 0.133 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
T/E | 0.6468 | likely_pathogenic | 0.6954 | pathogenic | 0.065 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
T/F | 0.7646 | likely_pathogenic | 0.7979 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
T/G | 0.4488 | ambiguous | 0.4648 | ambiguous | -0.478 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/H | 0.6727 | likely_pathogenic | 0.7032 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
T/I | 0.7975 | likely_pathogenic | 0.8337 | pathogenic | -0.059 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.516628654 | None | None | N |
T/K | 0.5889 | likely_pathogenic | 0.6337 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
T/L | 0.4828 | ambiguous | 0.5461 | ambiguous | -0.059 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/M | 0.2921 | likely_benign | 0.343 | ambiguous | 0.028 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
T/N | 0.3124 | likely_benign | 0.324 | benign | -0.147 | Destabilizing | 1.0 | D | 0.804 | deleterious | N | 0.493154362 | None | None | N |
T/P | 0.4325 | ambiguous | 0.4924 | ambiguous | -0.12 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.501888162 | None | None | N |
T/Q | 0.5351 | ambiguous | 0.5711 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
T/R | 0.5063 | ambiguous | 0.5694 | pathogenic | -0.131 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
T/S | 0.1672 | likely_benign | 0.1643 | benign | -0.358 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.485977673 | None | None | N |
T/V | 0.6522 | likely_pathogenic | 0.6983 | pathogenic | -0.12 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/W | 0.8933 | likely_pathogenic | 0.9012 | pathogenic | -0.767 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
T/Y | 0.7659 | likely_pathogenic | 0.7944 | pathogenic | -0.489 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.