Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5851 | 17776;17777;17778 | chr2:178731114;178731113;178731112 | chr2:179595841;179595840;179595839 |
N2AB | 5534 | 16825;16826;16827 | chr2:178731114;178731113;178731112 | chr2:179595841;179595840;179595839 |
N2A | 4607 | 14044;14045;14046 | chr2:178731114;178731113;178731112 | chr2:179595841;179595840;179595839 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs547188027 | 0.064 | 0.117 | N | 0.462 | 0.248 | 0.384752662912 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs547188027 | 0.064 | 0.117 | N | 0.462 | 0.248 | 0.384752662912 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
E/G | rs547188027 | 0.064 | 0.117 | N | 0.462 | 0.248 | 0.384752662912 | gnomAD-4.0.0 | 6.56832E-06 | None | None | None | None | I | None | 0 | 6.54622E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs878877605 | 0.697 | 0.117 | N | 0.339 | 0.24 | None | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 1.23987E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs878877605 | 0.697 | 0.117 | N | 0.339 | 0.24 | None | gnomAD-3.1.2 | 3.95E-05 | None | None | None | None | I | None | 1.44837E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs878877605 | 0.697 | 0.117 | N | 0.339 | 0.24 | None | gnomAD-4.0.0 | 9.13528E-06 | None | None | None | None | I | None | 1.5731E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | rs547188027 | None | 0.002 | N | 0.353 | 0.281 | 0.497871611283 | gnomAD-4.0.0 | 1.56042E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.575E-05 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1301 | likely_benign | 0.1236 | benign | -0.187 | Destabilizing | 0.052 | N | 0.406 | neutral | N | 0.488441975 | None | None | I |
E/C | 0.8136 | likely_pathogenic | 0.808 | pathogenic | -0.052 | Destabilizing | 0.935 | D | 0.445 | neutral | None | None | None | None | I |
E/D | 0.0825 | likely_benign | 0.0738 | benign | -0.245 | Destabilizing | None | N | 0.182 | neutral | N | 0.491615566 | None | None | I |
E/F | 0.681 | likely_pathogenic | 0.68 | pathogenic | -0.133 | Destabilizing | 0.555 | D | 0.435 | neutral | None | None | None | None | I |
E/G | 0.1251 | likely_benign | 0.1265 | benign | -0.358 | Destabilizing | 0.117 | N | 0.462 | neutral | N | 0.500160479 | None | None | I |
E/H | 0.4276 | ambiguous | 0.4282 | ambiguous | 0.224 | Stabilizing | 0.555 | D | 0.351 | neutral | None | None | None | None | I |
E/I | 0.3244 | likely_benign | 0.3193 | benign | 0.22 | Stabilizing | 0.081 | N | 0.45 | neutral | None | None | None | None | I |
E/K | 0.1543 | likely_benign | 0.1729 | benign | 0.373 | Stabilizing | 0.117 | N | 0.339 | neutral | N | 0.461716734 | None | None | I |
E/L | 0.373 | ambiguous | 0.3648 | ambiguous | 0.22 | Stabilizing | 0.081 | N | 0.457 | neutral | None | None | None | None | I |
E/M | 0.427 | ambiguous | 0.4358 | ambiguous | 0.161 | Stabilizing | 0.824 | D | 0.425 | neutral | None | None | None | None | I |
E/N | 0.1596 | likely_benign | 0.1437 | benign | 0.144 | Stabilizing | 0.081 | N | 0.348 | neutral | None | None | None | None | I |
E/P | 0.4021 | ambiguous | 0.3839 | ambiguous | 0.104 | Stabilizing | None | N | 0.179 | neutral | None | None | None | None | I |
E/Q | 0.151 | likely_benign | 0.1547 | benign | 0.167 | Stabilizing | 0.117 | N | 0.351 | neutral | N | 0.496021309 | None | None | I |
E/R | 0.2649 | likely_benign | 0.2913 | benign | 0.594 | Stabilizing | 0.38 | N | 0.353 | neutral | None | None | None | None | I |
E/S | 0.1861 | likely_benign | 0.1765 | benign | -0.029 | Destabilizing | 0.081 | N | 0.301 | neutral | None | None | None | None | I |
E/T | 0.2009 | likely_benign | 0.1983 | benign | 0.11 | Stabilizing | 0.149 | N | 0.432 | neutral | None | None | None | None | I |
E/V | 0.1758 | likely_benign | 0.1726 | benign | 0.104 | Stabilizing | 0.002 | N | 0.353 | neutral | N | 0.484825667 | None | None | I |
E/W | 0.8454 | likely_pathogenic | 0.8558 | pathogenic | -0.032 | Destabilizing | 0.935 | D | 0.503 | neutral | None | None | None | None | I |
E/Y | 0.504 | ambiguous | 0.495 | ambiguous | 0.103 | Stabilizing | 0.791 | D | 0.438 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.