Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5855 | 17788;17789;17790 | chr2:178731102;178731101;178731100 | chr2:179595829;179595828;179595827 |
N2AB | 5538 | 16837;16838;16839 | chr2:178731102;178731101;178731100 | chr2:179595829;179595828;179595827 |
N2A | 4611 | 14056;14057;14058 | chr2:178731102;178731101;178731100 | chr2:179595829;179595828;179595827 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.027 | N | 0.551 | 0.205 | 0.282179105231 | gnomAD-4.0.0 | 2.05271E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69853E-06 | 0 | 0 |
K/R | rs772017452 | -0.636 | None | N | 0.208 | 0.111 | 0.236278675362 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
K/R | rs772017452 | -0.636 | None | N | 0.208 | 0.111 | 0.236278675362 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs772017452 | -0.636 | None | N | 0.208 | 0.111 | 0.236278675362 | gnomAD-4.0.0 | 2.56249E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.42495E-05 | None | 0 | 0 | 2.39329E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3505 | ambiguous | 0.4167 | ambiguous | -0.919 | Destabilizing | 0.067 | N | 0.513 | neutral | None | None | None | None | N |
K/C | 0.587 | likely_pathogenic | 0.6848 | pathogenic | -0.882 | Destabilizing | 0.935 | D | 0.599 | neutral | None | None | None | None | N |
K/D | 0.706 | likely_pathogenic | 0.7908 | pathogenic | -0.776 | Destabilizing | 0.149 | N | 0.55 | neutral | None | None | None | None | N |
K/E | 0.2155 | likely_benign | 0.2793 | benign | -0.553 | Destabilizing | 0.027 | N | 0.551 | neutral | N | 0.51870338 | None | None | N |
K/F | 0.756 | likely_pathogenic | 0.8349 | pathogenic | -0.194 | Destabilizing | 0.38 | N | 0.601 | neutral | None | None | None | None | N |
K/G | 0.4299 | ambiguous | 0.5504 | ambiguous | -1.365 | Destabilizing | 0.149 | N | 0.56 | neutral | None | None | None | None | N |
K/H | 0.2678 | likely_benign | 0.3084 | benign | -1.318 | Destabilizing | 0.555 | D | 0.595 | neutral | None | None | None | None | N |
K/I | 0.3739 | ambiguous | 0.4592 | ambiguous | 0.305 | Stabilizing | 0.188 | N | 0.605 | neutral | D | 0.526229572 | None | None | N |
K/L | 0.3719 | ambiguous | 0.4476 | ambiguous | 0.305 | Stabilizing | 0.035 | N | 0.533 | neutral | None | None | None | None | N |
K/M | 0.2595 | likely_benign | 0.3123 | benign | -0.049 | Destabilizing | 0.016 | N | 0.393 | neutral | None | None | None | None | N |
K/N | 0.4287 | ambiguous | 0.524 | ambiguous | -1.091 | Destabilizing | 0.117 | N | 0.522 | neutral | N | 0.486226215 | None | None | N |
K/P | 0.9583 | likely_pathogenic | 0.9754 | pathogenic | -0.077 | Destabilizing | 0.555 | D | 0.601 | neutral | None | None | None | None | N |
K/Q | 0.1282 | likely_benign | 0.1477 | benign | -0.911 | Destabilizing | 0.002 | N | 0.378 | neutral | N | 0.500600409 | None | None | N |
K/R | 0.0694 | likely_benign | 0.0765 | benign | -0.651 | Destabilizing | None | N | 0.208 | neutral | N | 0.493135719 | None | None | N |
K/S | 0.3673 | ambiguous | 0.4477 | ambiguous | -1.68 | Destabilizing | 0.035 | N | 0.509 | neutral | None | None | None | None | N |
K/T | 0.1719 | likely_benign | 0.2039 | benign | -1.221 | Destabilizing | 0.002 | N | 0.324 | neutral | N | 0.478184909 | None | None | N |
K/V | 0.3204 | likely_benign | 0.3803 | ambiguous | -0.077 | Destabilizing | 0.081 | N | 0.559 | neutral | None | None | None | None | N |
K/W | 0.7126 | likely_pathogenic | 0.8076 | pathogenic | -0.158 | Destabilizing | 0.935 | D | 0.619 | neutral | None | None | None | None | N |
K/Y | 0.6171 | likely_pathogenic | 0.7145 | pathogenic | 0.137 | Stabilizing | 0.555 | D | 0.6 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.