Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5857 | 17794;17795;17796 | chr2:178731096;178731095;178731094 | chr2:179595823;179595822;179595821 |
N2AB | 5540 | 16843;16844;16845 | chr2:178731096;178731095;178731094 | chr2:179595823;179595822;179595821 |
N2A | 4613 | 14062;14063;14064 | chr2:178731096;178731095;178731094 | chr2:179595823;179595822;179595821 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs779004240 | -2.004 | None | N | 0.199 | 0.179 | 0.227934060464 | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | N | None | 0 | 1.73974E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
F/L | rs779004240 | -2.004 | None | N | 0.199 | 0.179 | 0.227934060464 | gnomAD-4.0.0 | 1.11399E-05 | None | None | None | None | N | None | 0 | 1.60088E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7284 | likely_pathogenic | 0.7665 | pathogenic | -2.634 | Highly Destabilizing | 0.129 | N | 0.515 | neutral | None | None | None | None | N |
F/C | 0.3122 | likely_benign | 0.3832 | ambiguous | -1.385 | Destabilizing | 0.978 | D | 0.561 | neutral | N | 0.484511246 | None | None | N |
F/D | 0.8879 | likely_pathogenic | 0.92 | pathogenic | -2.21 | Highly Destabilizing | 0.716 | D | 0.609 | neutral | None | None | None | None | N |
F/E | 0.8347 | likely_pathogenic | 0.8771 | pathogenic | -2.065 | Highly Destabilizing | 0.418 | N | 0.599 | neutral | None | None | None | None | N |
F/G | 0.8388 | likely_pathogenic | 0.8695 | pathogenic | -3.014 | Highly Destabilizing | 0.264 | N | 0.565 | neutral | None | None | None | None | N |
F/H | 0.4281 | ambiguous | 0.4728 | ambiguous | -1.275 | Destabilizing | 0.716 | D | 0.543 | neutral | None | None | None | None | N |
F/I | 0.323 | likely_benign | 0.378 | ambiguous | -1.431 | Destabilizing | 0.007 | N | 0.227 | neutral | N | 0.486667454 | None | None | N |
F/K | 0.6832 | likely_pathogenic | 0.7579 | pathogenic | -1.59 | Destabilizing | 0.418 | N | 0.595 | neutral | None | None | None | None | N |
F/L | 0.7058 | likely_pathogenic | 0.7576 | pathogenic | -1.431 | Destabilizing | None | N | 0.199 | neutral | N | 0.436641278 | None | None | N |
F/M | 0.464 | ambiguous | 0.506 | ambiguous | -1.087 | Destabilizing | 0.716 | D | 0.526 | neutral | None | None | None | None | N |
F/N | 0.6058 | likely_pathogenic | 0.6902 | pathogenic | -1.815 | Destabilizing | 0.716 | D | 0.607 | neutral | None | None | None | None | N |
F/P | 0.9987 | likely_pathogenic | 0.9991 | pathogenic | -1.835 | Destabilizing | 0.836 | D | 0.602 | neutral | None | None | None | None | N |
F/Q | 0.6542 | likely_pathogenic | 0.6993 | pathogenic | -1.886 | Destabilizing | 0.836 | D | 0.605 | neutral | None | None | None | None | N |
F/R | 0.546 | ambiguous | 0.6252 | pathogenic | -0.931 | Destabilizing | 0.716 | D | 0.605 | neutral | None | None | None | None | N |
F/S | 0.4912 | ambiguous | 0.5694 | pathogenic | -2.543 | Highly Destabilizing | 0.007 | N | 0.44 | neutral | N | 0.474989023 | None | None | N |
F/T | 0.617 | likely_pathogenic | 0.6731 | pathogenic | -2.305 | Highly Destabilizing | 0.264 | N | 0.519 | neutral | None | None | None | None | N |
F/V | 0.3337 | likely_benign | 0.387 | ambiguous | -1.835 | Destabilizing | 0.101 | N | 0.477 | neutral | N | 0.502290267 | None | None | N |
F/W | 0.3512 | ambiguous | 0.3913 | ambiguous | -0.353 | Destabilizing | 0.951 | D | 0.551 | neutral | None | None | None | None | N |
F/Y | 0.0947 | likely_benign | 0.1052 | benign | -0.65 | Destabilizing | 0.002 | N | 0.223 | neutral | N | 0.445452763 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.