Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5862 | 17809;17810;17811 | chr2:178731081;178731080;178731079 | chr2:179595808;179595807;179595806 |
N2AB | 5545 | 16858;16859;16860 | chr2:178731081;178731080;178731079 | chr2:179595808;179595807;179595806 |
N2A | 4618 | 14077;14078;14079 | chr2:178731081;178731080;178731079 | chr2:179595808;179595807;179595806 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs756303980 | 0.271 | 0.999 | D | 0.646 | 0.439 | 0.541105671861 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
E/K | rs756303980 | 0.271 | 0.999 | D | 0.646 | 0.439 | 0.541105671861 | gnomAD-4.0.0 | 2.05274E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69854E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1294 | likely_benign | 0.1434 | benign | -0.595 | Destabilizing | 0.999 | D | 0.669 | neutral | D | 0.525440138 | None | None | N |
E/C | 0.8161 | likely_pathogenic | 0.8737 | pathogenic | -0.366 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/D | 0.3018 | likely_benign | 0.352 | ambiguous | -0.673 | Destabilizing | 0.999 | D | 0.495 | neutral | D | 0.524573347 | None | None | N |
E/F | 0.7558 | likely_pathogenic | 0.8242 | pathogenic | 0.052 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/G | 0.2281 | likely_benign | 0.2824 | benign | -0.91 | Destabilizing | 1.0 | D | 0.674 | neutral | N | 0.512448 | None | None | N |
E/H | 0.5459 | ambiguous | 0.6555 | pathogenic | 0.181 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
E/I | 0.2678 | likely_benign | 0.3054 | benign | 0.247 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/K | 0.1496 | likely_benign | 0.2065 | benign | -0.049 | Destabilizing | 0.999 | D | 0.646 | neutral | D | 0.530056524 | None | None | N |
E/L | 0.2968 | likely_benign | 0.3436 | ambiguous | 0.247 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/M | 0.3534 | ambiguous | 0.3968 | ambiguous | 0.355 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
E/N | 0.3938 | ambiguous | 0.4644 | ambiguous | -0.689 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/P | 0.2674 | likely_benign | 0.2873 | benign | -0.013 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/Q | 0.1285 | likely_benign | 0.1495 | benign | -0.562 | Destabilizing | 1.0 | D | 0.614 | neutral | D | 0.52526678 | None | None | N |
E/R | 0.2762 | likely_benign | 0.3724 | ambiguous | 0.341 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/S | 0.2888 | likely_benign | 0.3397 | benign | -0.89 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
E/T | 0.2648 | likely_benign | 0.3142 | benign | -0.619 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/V | 0.1595 | likely_benign | 0.1772 | benign | -0.013 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | D | 0.531790108 | None | None | N |
E/W | 0.9244 | likely_pathogenic | 0.9521 | pathogenic | 0.359 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/Y | 0.66 | likely_pathogenic | 0.7571 | pathogenic | 0.335 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.