Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5863 | 17812;17813;17814 | chr2:178731078;178731077;178731076 | chr2:179595805;179595804;179595803 |
N2AB | 5546 | 16861;16862;16863 | chr2:178731078;178731077;178731076 | chr2:179595805;179595804;179595803 |
N2A | 4619 | 14080;14081;14082 | chr2:178731078;178731077;178731076 | chr2:179595805;179595804;179595803 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | rs2080395213 | None | 1.0 | D | 0.869 | 0.826 | 0.885250842136 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | None | None | 0.999 | D | 0.535 | 0.407 | 0.632750256606 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8517 | likely_pathogenic | 0.8974 | pathogenic | -2.164 | Highly Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
L/C | 0.8689 | likely_pathogenic | 0.9088 | pathogenic | -1.319 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/D | 0.9922 | likely_pathogenic | 0.9958 | pathogenic | -2.673 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/E | 0.9452 | likely_pathogenic | 0.9662 | pathogenic | -2.397 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/F | 0.4916 | ambiguous | 0.6053 | pathogenic | -1.325 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
L/G | 0.9674 | likely_pathogenic | 0.9806 | pathogenic | -2.71 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/H | 0.9061 | likely_pathogenic | 0.9434 | pathogenic | -2.244 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
L/I | 0.0945 | likely_benign | 0.1029 | benign | -0.56 | Destabilizing | 0.999 | D | 0.552 | neutral | None | None | None | None | N |
L/K | 0.8984 | likely_pathogenic | 0.9325 | pathogenic | -1.599 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/M | 0.2031 | likely_benign | 0.2352 | benign | -0.545 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.514519277 | None | None | N |
L/N | 0.9597 | likely_pathogenic | 0.9765 | pathogenic | -2.132 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
L/P | 0.9463 | likely_pathogenic | 0.9698 | pathogenic | -1.08 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.536106252 | None | None | N |
L/Q | 0.8431 | likely_pathogenic | 0.8895 | pathogenic | -1.887 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.536359741 | None | None | N |
L/R | 0.8613 | likely_pathogenic | 0.9066 | pathogenic | -1.588 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.524749947 | None | None | N |
L/S | 0.963 | likely_pathogenic | 0.9799 | pathogenic | -2.742 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/T | 0.8646 | likely_pathogenic | 0.9107 | pathogenic | -2.307 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
L/V | 0.1512 | likely_benign | 0.1651 | benign | -1.08 | Destabilizing | 0.999 | D | 0.535 | neutral | D | 0.539951018 | None | None | N |
L/W | 0.8219 | likely_pathogenic | 0.8749 | pathogenic | -1.7 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
L/Y | 0.8649 | likely_pathogenic | 0.9084 | pathogenic | -1.351 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.