Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5876 | 17851;17852;17853 | chr2:178731039;178731038;178731037 | chr2:179595766;179595765;179595764 |
N2AB | 5559 | 16900;16901;16902 | chr2:178731039;178731038;178731037 | chr2:179595766;179595765;179595764 |
N2A | 4632 | 14119;14120;14121 | chr2:178731039;178731038;178731037 | chr2:179595766;179595765;179595764 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1376088246 | None | 0.09 | N | 0.413 | 0.154 | 0.263140351381 | gnomAD-4.0.0 | 1.36851E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79906E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0765 | likely_benign | 0.0793 | benign | -0.611 | Destabilizing | 0.09 | N | 0.413 | neutral | N | 0.488015114 | None | None | N |
T/C | 0.4553 | ambiguous | 0.4654 | ambiguous | -0.401 | Destabilizing | 0.981 | D | 0.577 | neutral | None | None | None | None | N |
T/D | 0.2629 | likely_benign | 0.2837 | benign | 0.369 | Stabilizing | 0.241 | N | 0.505 | neutral | None | None | None | None | N |
T/E | 0.2244 | likely_benign | 0.2453 | benign | 0.342 | Stabilizing | 0.241 | N | 0.479 | neutral | None | None | None | None | N |
T/F | 0.2429 | likely_benign | 0.2364 | benign | -0.854 | Destabilizing | 0.932 | D | 0.663 | neutral | None | None | None | None | N |
T/G | 0.2032 | likely_benign | 0.2023 | benign | -0.815 | Destabilizing | 0.241 | N | 0.569 | neutral | None | None | None | None | N |
T/H | 0.1916 | likely_benign | 0.2025 | benign | -1.077 | Destabilizing | 0.818 | D | 0.651 | neutral | None | None | None | None | N |
T/I | 0.2226 | likely_benign | 0.2367 | benign | -0.175 | Destabilizing | 0.773 | D | 0.592 | neutral | N | 0.492467186 | None | None | N |
T/K | 0.1271 | likely_benign | 0.1402 | benign | -0.45 | Destabilizing | 0.193 | N | 0.47 | neutral | N | 0.462503381 | None | None | N |
T/L | 0.1151 | likely_benign | 0.1183 | benign | -0.175 | Destabilizing | 0.388 | N | 0.494 | neutral | None | None | None | None | N |
T/M | 0.0878 | likely_benign | 0.0882 | benign | -0.043 | Destabilizing | 0.981 | D | 0.569 | neutral | None | None | None | None | N |
T/N | 0.093 | likely_benign | 0.0978 | benign | -0.364 | Destabilizing | 0.002 | N | 0.166 | neutral | None | None | None | None | N |
T/P | 0.2708 | likely_benign | 0.2972 | benign | -0.289 | Destabilizing | 0.773 | D | 0.591 | neutral | N | 0.500139049 | None | None | N |
T/Q | 0.1651 | likely_benign | 0.181 | benign | -0.512 | Destabilizing | 0.69 | D | 0.583 | neutral | None | None | None | None | N |
T/R | 0.1051 | likely_benign | 0.1183 | benign | -0.257 | Destabilizing | 0.003 | N | 0.287 | neutral | N | 0.482572009 | None | None | N |
T/S | 0.0973 | likely_benign | 0.0934 | benign | -0.662 | Destabilizing | 0.018 | N | 0.213 | neutral | N | 0.444264337 | None | None | N |
T/V | 0.1747 | likely_benign | 0.176 | benign | -0.289 | Destabilizing | 0.388 | N | 0.466 | neutral | None | None | None | None | N |
T/W | 0.5472 | ambiguous | 0.5499 | ambiguous | -0.807 | Destabilizing | 0.981 | D | 0.702 | prob.neutral | None | None | None | None | N |
T/Y | 0.2393 | likely_benign | 0.244 | benign | -0.549 | Destabilizing | 0.932 | D | 0.662 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.