Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5886 | 17881;17882;17883 | chr2:178731009;178731008;178731007 | chr2:179595736;179595735;179595734 |
N2AB | 5569 | 16930;16931;16932 | chr2:178731009;178731008;178731007 | chr2:179595736;179595735;179595734 |
N2A | 4642 | 14149;14150;14151 | chr2:178731009;178731008;178731007 | chr2:179595736;179595735;179595734 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.02 | N | 0.178 | 0.146 | 0.220303561663 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85894E-06 | 0 | 0 |
E/V | None | None | 0.991 | N | 0.743 | 0.479 | 0.653813299475 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85894E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1838 | likely_benign | 0.1972 | benign | -0.677 | Destabilizing | 0.939 | D | 0.589 | neutral | N | 0.48942341 | None | None | N |
E/C | 0.8508 | likely_pathogenic | 0.8866 | pathogenic | -0.168 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
E/D | 0.1113 | likely_benign | 0.1145 | benign | -0.654 | Destabilizing | 0.02 | N | 0.178 | neutral | N | 0.422526414 | None | None | N |
E/F | 0.8152 | likely_pathogenic | 0.8479 | pathogenic | -0.427 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
E/G | 0.1387 | likely_benign | 0.1695 | benign | -0.945 | Destabilizing | 0.939 | D | 0.592 | neutral | N | 0.490290202 | None | None | N |
E/H | 0.4879 | ambiguous | 0.5278 | ambiguous | -0.468 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
E/I | 0.512 | ambiguous | 0.5464 | ambiguous | 0.022 | Stabilizing | 0.993 | D | 0.808 | deleterious | None | None | None | None | N |
E/K | 0.1606 | likely_benign | 0.1945 | benign | -0.047 | Destabilizing | 0.939 | D | 0.529 | neutral | N | 0.438917232 | None | None | N |
E/L | 0.4429 | ambiguous | 0.4835 | ambiguous | 0.022 | Stabilizing | 0.993 | D | 0.775 | deleterious | None | None | None | None | N |
E/M | 0.5122 | ambiguous | 0.5548 | ambiguous | 0.346 | Stabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
E/N | 0.2287 | likely_benign | 0.253 | benign | -0.439 | Destabilizing | 0.973 | D | 0.645 | neutral | None | None | None | None | N |
E/P | 0.9082 | likely_pathogenic | 0.9329 | pathogenic | -0.19 | Destabilizing | 0.993 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/Q | 0.1385 | likely_benign | 0.1469 | benign | -0.375 | Destabilizing | 0.991 | D | 0.627 | neutral | N | 0.461620733 | None | None | N |
E/R | 0.2699 | likely_benign | 0.3177 | benign | 0.165 | Stabilizing | 0.993 | D | 0.692 | prob.neutral | None | None | None | None | N |
E/S | 0.2006 | likely_benign | 0.2176 | benign | -0.649 | Destabilizing | 0.953 | D | 0.541 | neutral | None | None | None | None | N |
E/T | 0.2408 | likely_benign | 0.2694 | benign | -0.43 | Destabilizing | 0.993 | D | 0.661 | neutral | None | None | None | None | N |
E/V | 0.2861 | likely_benign | 0.3157 | benign | -0.19 | Destabilizing | 0.991 | D | 0.743 | deleterious | N | 0.490636918 | None | None | N |
E/W | 0.9044 | likely_pathogenic | 0.9253 | pathogenic | -0.218 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
E/Y | 0.6935 | likely_pathogenic | 0.75 | pathogenic | -0.178 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.