Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5888 | 17887;17888;17889 | chr2:178731003;178731002;178731001 | chr2:179595730;179595729;179595728 |
N2AB | 5571 | 16936;16937;16938 | chr2:178731003;178731002;178731001 | chr2:179595730;179595729;179595728 |
N2A | 4644 | 14155;14156;14157 | chr2:178731003;178731002;178731001 | chr2:179595730;179595729;179595728 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1176630529 | 0.198 | None | N | 0.218 | 0.076 | 0.0846915920261 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/Q | rs1176630529 | 0.198 | None | N | 0.218 | 0.076 | 0.0846915920261 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43361E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1138 | likely_benign | 0.1337 | benign | 0.01 | Stabilizing | 0.016 | N | 0.279 | neutral | None | None | None | None | N |
K/C | 0.4447 | ambiguous | 0.5016 | ambiguous | -0.148 | Destabilizing | 0.864 | D | 0.263 | neutral | None | None | None | None | N |
K/D | 0.1728 | likely_benign | 0.2211 | benign | 0.069 | Stabilizing | 0.038 | N | 0.293 | neutral | None | None | None | None | N |
K/E | 0.0678 | likely_benign | 0.0906 | benign | 0.076 | Stabilizing | 0.012 | N | 0.304 | neutral | N | 0.364948964 | None | None | N |
K/F | 0.4553 | ambiguous | 0.5371 | ambiguous | -0.186 | Destabilizing | 0.356 | N | 0.287 | neutral | None | None | None | None | N |
K/G | 0.1399 | likely_benign | 0.1651 | benign | -0.193 | Destabilizing | 0.016 | N | 0.28 | neutral | None | None | None | None | N |
K/H | 0.1839 | likely_benign | 0.1994 | benign | -0.435 | Destabilizing | 0.214 | N | 0.265 | neutral | None | None | None | None | N |
K/I | 0.1572 | likely_benign | 0.2195 | benign | 0.469 | Stabilizing | 0.171 | N | 0.322 | neutral | N | 0.4445114 | None | None | N |
K/L | 0.1478 | likely_benign | 0.1839 | benign | 0.469 | Stabilizing | 0.038 | N | 0.312 | neutral | None | None | None | None | N |
K/M | 0.1017 | likely_benign | 0.1213 | benign | 0.294 | Stabilizing | 0.356 | N | 0.269 | neutral | None | None | None | None | N |
K/N | 0.1169 | likely_benign | 0.1473 | benign | 0.268 | Stabilizing | 0.001 | N | 0.169 | neutral | N | 0.403086065 | None | None | N |
K/P | 0.337 | likely_benign | 0.3916 | ambiguous | 0.344 | Stabilizing | 0.136 | N | 0.351 | neutral | None | None | None | None | N |
K/Q | 0.0787 | likely_benign | 0.0872 | benign | 0.081 | Stabilizing | None | N | 0.218 | neutral | N | 0.376400896 | None | None | N |
K/R | 0.0759 | likely_benign | 0.0783 | benign | 0.021 | Stabilizing | None | N | 0.104 | neutral | N | 0.42003703 | None | None | N |
K/S | 0.1207 | likely_benign | 0.15 | benign | -0.236 | Destabilizing | None | N | 0.095 | neutral | None | None | None | None | N |
K/T | 0.0708 | likely_benign | 0.0853 | benign | -0.08 | Destabilizing | None | N | 0.193 | neutral | N | 0.384847021 | None | None | N |
K/V | 0.1529 | likely_benign | 0.2 | benign | 0.344 | Stabilizing | 0.038 | N | 0.309 | neutral | None | None | None | None | N |
K/W | 0.4789 | ambiguous | 0.5101 | ambiguous | -0.193 | Destabilizing | 0.864 | D | 0.307 | neutral | None | None | None | None | N |
K/Y | 0.3486 | ambiguous | 0.4102 | ambiguous | 0.159 | Stabilizing | 0.356 | N | 0.28 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.